march9 (march9,LOC107593952,LOC107664138,LOC107714987,LOC107706970,LOC107599679,LOC107697857,LOC107088728,LOC108433385,LOC103130462,LOC105930772)


Basic Information

Item Value
gene id march9
gene name march9,LOC107593952,LOC107664138,LOC107714987,LOC107706970,LOC107599679,LOC107697857,LOC107088728,LOC108433385,LOC103130462,LOC105930772
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 18045926 ~ 18058739 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU235255
AGAGAGGCTCCTGGAGCTGTGAGCTCTGCTACTTCAAGTACCAGGTCCTGGCCATCAGCACCAAGAACCCGCTGCAGTGGCAGGCCATTTCTCTGACGGTGATTGAGAAGGTGCAGATCGCCGCCATTATCCTGGGCTCACTCTTCCTCATCGCCAGTATCTCGTGGCTGGTGTGGTCTTCTCTCAGCCCGTCTGCCAAGTGGCAGCGCCAGGACCTGCTCTTCCAGATCTGCTACGGCATGTACGGCTTCATGGACATTGTGTGCATAGGCCTTATAATCCACGAGGGCTCATCGGTGTATAGAATCTTCAAGCGATGGCAGGCTGTGAACCAGCAGTGGAAAGTATTGAACTATGAGAAGTCGAAGGACTTGGGAGACCCGGTGAGCTCCAGCAGCAAGGCGGGCGGCCGCGGCTCTCGCAGCAACCCTCACGGCCTGGCCAGCGGCAGCAGGGGGGGCCAGCGAGTGCGGCGGTTAAGGACTATCCTCAACCACCACTGCGGTTACACCATCCTCCACATCCTCAGCCAGCTGCGGCCCAGCGACACGCGGCTCGGCACCGCCACCAACCGCGAGGTGGTCATGCGGGTCACGACCGTATGAGGTCGCCCCCCGGAGCGAGAGAAGACGCGTTTTCTGCCTTCTCCTGCAAAAGACGGCGTCACGATGCCAGGACGAAcgcgtttttttttccttggtgACGACGTTTCGGACAGACAGGAGCGCGCACGGGACATTGGCGCCAGCCGTTTCTATCGGCGAGACTCTCTCATGATCCTAGCACACTATTGCATTTTTAAGTTCGATTTCCTCgctggtgttgtttttttatcgaTGCggtttttaaaaacgttttgatTTTCTAAGGGAGAATGGTACATGGAGCAACACCGACGTGTGATGTATATGGTGACTCATGTGGACCTATCGTTGTAAATGATGTTTACGGATGCTTCTGACGCAGCAAGAAAGCCAACCATAACCAAACGATCACGACACAATAACCAGGGAAAAAACGAGATACGAATTGTTACatactaaaatatatcaaaGGGGAGGGTGCAATAAGACATAATAAGATTATACAGAGAACAAAAAGACGTAAACGTTTGAAAAGAATTTGATCTTCTCTGCAATAAAGATacctgtacattttacagtgaCCTTTGCATGAGGGTAGAGTTTTATGCCTCCTCGACACATGGACatgatgaatttgttttattcagaatGGTGCTCGTTTGAATAAA
>XM_043223966.1
AAACGTCACGACGAGAGATCAGCACCTCGGACAGCGGCGCCCGTCGAAATCCAGCATACACTTGGAATCTCCCAAAGGAGAACGGAGCAGGGGGCGCGCACGGCAGCGAGACgtttgtaaatgaatcattttgattGGGCGAGAGCGCGCCTTGGAAACAAGGGCCGTGTGTTGATGCGCACGGCAGAACGTCCATTTCGAGGATGAATCAGAGGGGAGCAGCATCAGCATCCCCATCACATTACGATCCACGGCATCAGCCGCTCCGACCGACCGCCATCGCACCCCGCGGAGGAGGAAAATAGGCGAACCTAAGCGCGgcgcctttttattttttcccttctGGAAGCTCCATCTTCCTTTGAACGTGGCGAGGAACCATATCGGCCCGGGAGGGGGATGGTGATGGTGAACTTCAAATGGAGACAAGATGCTGGCGTTTCCCCCCCCAGCTCTTCATCCGATGCCCGCCGTCGTTATTGCCGTTTTTGAAGCACCAACCTAATGGATTGTTCTAAACTCTGCGTTTGGGATGGGAGGTGGCGTCGGAATATGTCGATGGGAAGATGCACAAGGAAATGATGTGAAAGCTTCGTCATGACGCCTCTGatgaacaataaacaaaacTATAGGATTGCGCCCGAATCCAGCTTTCAGCTCTTTTggattatgtttttatgctgAAGGATCCCCCCCCCCACCCGACGATGACTGTGTGTGGCAGCGATGCTCTGAAATGCCATTTTGCATCTTCCCTGTCTCTCATCCGCGCGTCCAGGCTGTGGATTGCTGGGAGTTTGTGAAAATCGCATCTCTTTAGACCTGGAAACAATGCATTGTTGGCTATTCATCGCAATACCGTAGTCTTATTATTGTCATCCTCGCGGCCAGCGATGATTGTATCAGAGAAACAACATCGGCCCTAACAGGCACATACATGCCATCAGACGGAAAATAACAAGCCTGGAGATTTTCTGACCAATTACCTTTGGTTTGGACACTTTCCTCTGAGACTTCAGGGTAGCAACTGCGTTTCTGCcgaatgaaatattaataataggcCTAACGGGatcaataataaatcaaataatactaataaaaacaataatgcgTAAAAAACACTAACgctatataaaaacaacaacaataataattatcaaGCATAATAAtattcgtatatatatatatataaatcaatactcctttcgtaaaaaaaaaaaaaattcaaaaattcacTTCAGCCATACGACATACACATGTAGTCAAAGATGTTCAAGAACCGGATCCGCATGTTTTTTAACGAACTGAAGGTGCTGGTTTTTATGCGATCCGGTTCTAGACGCTCCGACAGTGACGCAGAGCCGAGCAGACGACCCAACAGCAGCATGAGGGGGCTCGGGATGGGCGGCTGCGGATGGCCGCCCTTCGTGGACTGCTCCAGCCGCGACGACGAGGAAGAGTACTACGGGAGCGACCCCAGGCCCAGGAGCCTGGCGTTCGAGGAGAAAGACCCCAAACTGCAGGCGGGCCTGGACGCGGTCAGCCTCACCAGCAGCACGGGCAGCGGCATGAGAACGCCTCAGTGTCGGATCTGCTTCCAAGGGCCCGAGCAGGGGGAGCTGTTGAGCCCGTGCCGCTGCGACGGCTCCGTGCGCTGCACCCACCAGCCCTGTCTGATTCGCTGGATCAGCGAGAGAGGCTCCTGGAGCTGTGAGCTCTGCTACTTCAAGTACCAGGTCCTGGCCATCAGCACCAAGAACCCGCTGCAGTGGCAGGCCATTTCTCTGACGGTGATTGAGAAGGTGCAGATCGCCGCCATTATCCTGGGCTCACTCTTCCTCATCGCCAGTATCTCGTGGCTGGTGTGGTCTTCTCTCAGCCCGTCTGCCAAGTGGCAGCGCCAGGACCTGCTCTTCCAGATCTGCTACGGCATGTACGGCTTCATGGACATTGTGTGCATAGGCCTTATAATCCACGAGGGCTCATCGGTGTATAGAATCTTCAAGCGATGGCAGGCTGTGAACCAGCAGTGGAAAGTATTGAACTATGAGAAGTCGAAGGACTTGGGAGACCCGGTGAGCTCCAGCAGCAAGGCGGGCGGCCGCGGCTCTCGCAGCAACCCTCACGGCCTGGCCAGCGGCAGCAGGGGGGGCCAGCGAGTGCGGCGGTTAAGGACTATCCTCAACCACCACTGCGGTTACACCATCCTCCACATCCTCAGCCAGCTGCGGCCCAGCGACACGCGGCTCGGCACCGCCACCAACCGCGAGGTGGTCATGCGGGTCACGACCGTATGAGGTCGCCCCCCGGAGCGAGAGAAGACGCGTTTTCTGCCTTCTCCTGCAAAAGACGGCGTCACGATGCCAGGACGAAcgcgtttttttttccttggtgACGACGTTTCGGACAGACAGGAGCGCGCACGGGACATTGGCGCCAGCCGTTTCTATCGGCGAGACTCTCTCATGATCCTAGCACACTATTGCATTTTTAAGTTCGATTTCCTCgctggtgttgtttttttatcgaTGCggtttttaaaaacgttttgatTTTCTAAGGGAGAATGGTACATGGAGCAACACCGACGTGTGATGTATATGGTGACTCATGTGGACCTATCGTTGTAAATGATGTTTACGGATGCTTCTGACGCAGCAAGAAAGCCAACCATAACCAAACGATCACGACACAATAACCAGGGAAAAAACGAGATACGAATTGTTACatactaaaatatatcaaaGGGGAGGGTGCAATAAGACATAATAAGATTATACAGAGAACAAAAAGACGTAAACGTTTGAAAAGAATTTGATCTTCTCTGCAATAAAGATacctgtacattttacagtgaCCTTTGCATGAGGGTAGAGTTTTATGCCTCCTCGACACATGGACatgatgaatttgttttattcagaatGGTGCTCGTTTGAATAAACACTACTATTCA

Function

symbol description
march9 Predicted to enable zinc ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MARCHF9 (membrane associated ring-CH-type finger 9).

NR:

description
E3 ubiquitin-protein ligase MARCH9

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K10659 MARCH4_9_11; E3 ubiquitin-protein ligase MARCH4/9/11

RNA

RNA id representative length rna type GC content exon number start site end site
TU235255 False 1252 TUCP 0.51 3 18045938 18047878
XM_043223966.1 True 2956 mRNA 0.51 4 18045926 18058739

Neighbor

gene id symbol gene type direction distance location
LOC122329235 LOC107714952,LOC107664261,LOC107594045,LOC107599127,LOC107706987,LOC107697913 coding downstream 108347 17935574 ~ 17937579 (-)
LOC122329192 cptp,LOC107706969,LOC107697856,LOC107664144,LOC107599683,LOC107594044 coding downstream 119722 17924639 ~ 17926204 (-)
ubxn10 LOC107714950,LOC107664163,LOC107706981,LOC107563148,LOC107697872,LOC107599688 coding downstream 121423 17922587 ~ 17924503 (-)
vwa5b1 vwa5b1,LOC107706959,LOC107714920,LOC107664114,LOC107563127 coding downstream 131389 17879067 ~ 17914537 (-)
fam43b fam43b,LOC107563144,LOC107714947,LOC107664143,LOC107697855,LOC107577211 coding downstream 208954 17834843 ~ 17836972 (-)
tspan31 tspan31,tsn31,LOC107599072,LOC107593953 coding upstream 6531 18065270 ~ 18070963 (-)
gpr182 gpr182,LOC107664254,LOC107697920,LOC107593955,LOC107706991,LOC107599064 coding upstream 43572 18102311 ~ 18105120 (-)
pip4k2ca pip4k2ca,LOC107714989,LOC107598997,LOC107664235,LOC107697923,LOC107593957 coding upstream 49146 18107885 ~ 18116326 (-)
igfbp6b igfbp6b,LOC107714992,LOC107664167,LOC107593959,LOC107697925,LOC107599019,LOC105912701 coding upstream 61556 18120295 ~ 18123704 (-)
lima1a LOC107714990,LOC107664165,LOC107593956,LOC107706995,LOC107697921 coding upstream 103721 18162460 ~ 18177490 (-)
G158882 NA non-coding downstream 2450 18041910 ~ 18043476 (-)
G158892 NA non-coding downstream 30049 18012126 ~ 18015877 (-)
G158887 NA non-coding downstream 44236 17999833 ~ 18001690 (-)
G158774 NA non-coding downstream 101766 17943925 ~ 17944160 (-)
LOC122328377 NA non-coding downstream 201824 17799842 ~ 17844102 (-)
G158947 NA non-coding upstream 134231 18192970 ~ 18193557 (-)
G158946 NA non-coding upstream 135513 18194252 ~ 18194524 (-)
G158948 LOC107599665,LOC107664257,LOC107714993,LOC107697859,LOC107706997 non-coding upstream 136660 18195399 ~ 18196369 (-)
G158949 NA non-coding upstream 142028 18200767 ~ 18200966 (-)
G158950 NA non-coding upstream 144297 18203036 ~ 18203452 (-)
coq10a si:dkey-190g6.2,LOC107671896,LOC107715030,LOC107598614,LOC107697969,LOC102210977,LOC108425511,LOC102797363 other downstream 623409 17413703 ~ 17422517 (-)
G158609 NA other downstream 702541 17339267 ~ 17343385 (-)
slc48a1a slc48a1a,LOC107671836,LOC107598487,LOC107594008,LOC107756371,LOC107697869,LOC107757747 other downstream 861541 17176625 ~ 17184385 (-)
G158336 LOC107716221,LOC107570608,LOC107586536,LOC106567035 other downstream 1687221 16355369 ~ 16358705 (-)
tac3a LOC107708854,LOC107571761,LOC107681951,LOC107586540,LOC107695797 other downstream 1802531 16240810 ~ 16243395 (-)
hnrnpa1b hnrnpa1b,LOC107664187,LOC107714994,LOC107707002 other upstream 172904 18231643 ~ 18235536 (-)
hoxc1a LOC107598919,LOC107707004,LOC107697929,LOC107594049,LOC107664160,LOC107714959 other upstream 237307 18296046 ~ 18302575 (-)
hoxc6a hoxc6a,LOC107593966,LOC107664205,LOC107714999,LOC107706971,LOC107697939,LOC107598897 other upstream 283595 18342334 ~ 18350347 (-)
G159076 LOC107715021,LOC107664216,LOC107593990,LOC107598736,LOC107697953,LOC107707026 other upstream 688652 18747391 ~ 18754712 (-)

Expression


Co-expression Network