G15966


Basic Information

Item Value
gene id G15966
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5472040 ~ 5472377 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17852
GGTGGAGTATGACACTGTGAAGCATTTCAAAACAAAATGAATGCTGCTCTCCCGGTTATGAGATTATGGCCTCATTTAGGGGTCATCAAAATGCGTTTTTTGTTTTGTTTTTGTTTTTGTACTTTTATTTGTTTGTAAAAAGTTTACATGTTACATAAAGCTCTTTTTTTTTTTTTTTTTTTTTGCTGTTTTTTAACTTTCAAAAATTTCAAATTATGTCAACTGATCATTCTTTTTTAGAAATAAAAAAGAAAAATACAGCATCACATGTAATCATAAAAATACACATGTAATATAAAAATACAGTATCACATGTAATCACATTTATAATAGAAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17852 True 338 lncRNA 0.50 1 5472040 5472377

Neighbor

gene id symbol gene type direction distance location
CI01000001_05427300_05427801 NA coding upstream 44222 5427232 ~ 5427818 (+)
CI01000001_05401665_05402500 EMP3B, EMP3 coding upstream 69269 5401665 ~ 5402771 (+)
CI01000001_05365373_05384192 MYH7B, MYH7BA, MYH7BB coding upstream 87802 5365162 ~ 5384238 (+)
CI01000001_05279884_05287123 NA coding upstream 184661 5279837 ~ 5287698 (+)
CI01000001_05270301_05279405 AVPR2AB coding upstream 191233 5270301 ~ 5280807 (+)
CI01000001_05478200_05480124 NA coding downstream 5823 5478200 ~ 5480504 (+)
CI01000001_05487409_05494726 NA coding downstream 14925 5487302 ~ 5495336 (+)
CI01000001_05498507_05500723 NA coding downstream 25833 5498210 ~ 5501377 (+)
CI01000001_05565644_05568075 NA coding downstream 93267 5565644 ~ 5568488 (+)
CI01000001_05579315_05580553 CCDC115 coding downstream 106938 5579315 ~ 5580703 (+)
G15964 NA non-coding upstream 1791 5470040 ~ 5470249 (+)
G15962 NA non-coding upstream 9447 5462386 ~ 5462593 (+)
G15960 NA non-coding upstream 22389 5449409 ~ 5449651 (+)
G15959 NA non-coding upstream 22647 5449160 ~ 5449393 (+)
G15957 NA non-coding upstream 24099 5447301 ~ 5447941 (+)
G15980 NA non-coding downstream 99546 5571923 ~ 5572212 (+)
G15978 NA non-coding downstream 105033 5577410 ~ 5578032 (+)
G15983 NA non-coding downstream 126461 5598838 ~ 5599260 (+)
G15984 NA non-coding downstream 127846 5600223 ~ 5600503 (+)
G15794 NA other upstream 407336 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 1850589 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3801036 1667762 ~ 1671167 (+)
G13051 NA other upstream 4426888 1043713 ~ 1045152 (+)
G15995 NA other downstream 239508 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2060195 7531541 ~ 7540586 (+)
G17234 NA other downstream 2559747 8032124 ~ 8032483 (+)
G17353 NA other downstream 3743645 9216022 ~ 9228859 (+)
G17354 NA other downstream 3762086 9234463 ~ 9240677 (+)

Expression


Co-expression Network