cfap126


Basic Information

Item Value
gene id cfap126
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11866718 ~ 11868437 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224346.1
GCGAAATTGTTGAGAGGTTGCTAGGAGACCACTGCCAACACACTGGAGCTGAACGATGTCGACTAGTTACTCTGCAAACCAGtATGATAGCGCCTTTAAGTCGCAAAAGCTCCAGAACTGGACcatcccaaaacatttcaaagagagaccagcagcagcagaaggcCACACTGCATTTATAGCCACAGACCGTGGCCACCTTCTACCTGGTGTGAGAACAAAGgGTGGAAGTCCATGGCCAGCATTCCAAGGCACATGGGATTTACCTCGGTATATCCCTCCTGCTTCTTTAAACCCCACTGCCCGTTCACAAGAGGGCCAGGATCGCCTCAGGACCTGGGGACAGATGAAATTACCCAAAAACCAGACTTATGGACCCTCTGGTGGCATCCAGGTTACAAACAGAACCGTTAACAACCTGGAAAACATAAAAGTGGAGCAGCCTGCAGAAGAGACAAAAATGCCAATGAATGACATAGACCCAGATGAACTAGAAAGGCCCAAATCACAGCACAGCCAAGACCAGTCTAGACCAACAAGCCAGCAGGTTCAGTCTAACCCCGTAAACCTTCCTGAAAACCAAGCTCAGTCTAGACCAGGTAGTCATCACAGCCAACAGGCTCCATCCAGACCAGCCACTCAAGAGAGCCAAGCGGAGTTAAGACCACCAACCCAGAACAGCAGACCAGCATCTCAGCAGATATAACACCATTTATAATCAGATCCCCTGCATGGGCAGTTATAAAAGTTGTTCCATGAAATGGCATTACGTAAGTCTAACACTTCTTTGAAAAGCATTAACACATCAACTGAATTGTTTCATTGAAGCGAAAGCTGATTAATTTTACTACATGGCTTTTGTAATGGAATCTGCTTAGATGAAATACTGATATctatatatcaattatattctttaaaaaagaaaaacagcacaa

Function

NR:

description
LOW QUALITY PROTEIN: protein Flattop-like

GO:      GO:0017137

KEGG:

id description
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224346.1 True 935 mRNA 0.45 5 11866718 11868437

Neighbor

gene id symbol gene type direction distance location
emd LOC107737610,LOC107671981,LOC107712726,LOC107560939,LOC107699568,LOC107570273 coding upstream 66802 11796494 ~ 11799916 (+)
flna flna,LOC107737611,LOC107712729,LOC107570276,LOC107699576 coding upstream 71985 11762429 ~ 11794733 (+)
dnase1l1 dnase1l3,LOC107737612,LOC107672041,LOC107560934,LOC107570280,LOC107712731 coding upstream 124847 11738795 ~ 11741871 (+)
abhd6b abhd6b,LOC107737716,LOC107712730,LOC107560889,LOC107671974,LOC107699577 coding upstream 140226 11723156 ~ 11726492 (+)
flnb LOC107737717,LOC107560870,LOC107671935 coding upstream 144432 11705759 ~ 11722286 (+)
tnnc1b tnnc1b,LOC107671989,LOC107568847,LOC108276054,LOC107593406,LOC105890642,LOC103374679 coding downstream 54447 11922884 ~ 11924595 (+)
tnnc2.1 si:rp71-17i16.4,LOC107737591,LOC107568845,LOC103044939,LOC108434838,LOC103362008,LOC102782874 coding downstream 180324 12048761 ~ 12060362 (+)
tnnc2.2 tnnc2,LOC107699597,LOC107593400,LOC107672048,LOC107737590,LOC107568846,LOC108276484,LOC108233126,LOC108434847,LOC102220434 coding downstream 193279 12061716 ~ 12064341 (+)
slc35c2 slc35c2,LOC107737589,LOC107712705,LOC107672033,LOC107699599 coding downstream 198668 12067105 ~ 12074465 (+)
LOC122329002 LOC107737588,LOC107712700,LOC107672031,LOC107699598,LOC101884357 coding downstream 207816 12076253 ~ 12098773 (+)
G156823 LOC107560942,LOC107737604,LOC107712727,LOC107672007 non-coding upstream 43874 11763707 ~ 11822844 (+)
G156828 NA non-coding upstream 131781 11734256 ~ 11734937 (+)
G156701 NA non-coding upstream 210338 11655795 ~ 11656380 (+)
G156700 NA non-coding upstream 211402 11654916 ~ 11655316 (+)
G156699 asb14b,LOC107560887,LOC107671999,LOC107737718 non-coding upstream 212101 11654255 ~ 11654617 (+)
G156881 LOC107737595,LOC107671985,LOC107568839 non-coding downstream 78247 11946684 ~ 11972922 (+)
LOC122328486 NA non-coding downstream 161709 12030146 ~ 12037888 (+)
G156933 NA non-coding downstream 306093 12174530 ~ 12174915 (+)
G156931 NA non-coding downstream 335819 12204256 ~ 12205395 (+)
G157079 NA non-coding downstream 371412 12239849 ~ 12241401 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 120148 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other upstream 134357 11730980 ~ 11732361 (+)
G156586 NA other upstream 689685 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 781114 11077154 ~ 11085604 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other upstream 942730 10913904 ~ 10923988 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other downstream 377756 12246193 ~ 12251982 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 2225641 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 2431264 14299701 ~ 14343274 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 2735356 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 2741092 14609529 ~ 15153978 (+)

Expression


Co-expression Network