Gene
RNA
| Item | Value |
|---|---|
| gene id | G15987 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 5612334 ~ 5613782 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU17882 | True | 1449 | lncRNA | 0.42 | 1 | 5612334 | 5613782 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_05587090_05591952 | APOBEC2B, APOBEC2 | coding | upstream | 20196 | 5587090 ~ 5592138 (+) |
| CI01000001_05581818_05584137 | NA | coding | upstream | 27713 | 5581818 ~ 5584621 (+) |
| CI01000001_05579315_05580553 | CCDC115 | coding | upstream | 31631 | 5579315 ~ 5580703 (+) |
| CI01000001_05565644_05568075 | NA | coding | upstream | 43846 | 5565644 ~ 5568488 (+) |
| CI01000001_05498507_05500723 | NA | coding | upstream | 111218 | 5498210 ~ 5501377 (+) |
| CI01000001_05689002_05702184 | NA | coding | downstream | 74873 | 5688655 ~ 5702684 (+) |
| CI01000001_05734513_05735964 | NA | coding | downstream | 119339 | 5733121 ~ 5736013 (+) |
| CI01000001_05795264_05798555 | ATP6AP1LB | coding | downstream | 181482 | 5795264 ~ 5799834 (+) |
| CI01000001_05803416_05809184 | SLMAPB | coding | downstream | 189634 | 5803416 ~ 5809306 (+) |
| CI01000001_05814686_05836203 | NA | coding | downstream | 200864 | 5814646 ~ 5837238 (+) |
| G15989 | NA | non-coding | upstream | 56 | 5606519 ~ 5612278 (+) |
| G15985 | NA | non-coding | upstream | 10894 | 5601156 ~ 5601440 (+) |
| G15984 | NA | non-coding | upstream | 11831 | 5600223 ~ 5600503 (+) |
| G15983 | NA | non-coding | upstream | 13074 | 5598838 ~ 5599260 (+) |
| G15978 | NA | non-coding | upstream | 34302 | 5577410 ~ 5578032 (+) |
| G15991 | NA | non-coding | downstream | 12825 | 5626607 ~ 5626851 (+) |
| G15993 | NA | non-coding | downstream | 16072 | 5629854 ~ 5630088 (+) |
| G15998 | NA | non-coding | downstream | 32164 | 5645946 ~ 5646215 (+) |
| G15999 | NA | non-coding | downstream | 33452 | 5647234 ~ 5647464 (+) |
| G16001 | NA | non-coding | downstream | 40014 | 5653796 ~ 5654020 (+) |
| CI01000001_05279884_05287123 | NA | other | upstream | 322378 | 5279837 ~ 5287698 (+) |
| G15794 | NA | other | upstream | 547630 | 5061218 ~ 5064704 (+) |
| CI01000001_03618075_03620436 | NA | other | upstream | 1990883 | 3618075 ~ 3621451 (+) |
| CI01000001_01668334_01670035 | CAMK2N1B | other | upstream | 3941330 | 1667762 ~ 1671167 (+) |
| G13051 | NA | other | upstream | 4567182 | 1043713 ~ 1045152 (+) |
| G15995 | NA | other | downstream | 98103 | 5711885 ~ 5714951 (+) |
| CI01000001_07531945_07539781 | NA | other | downstream | 1918790 | 7531541 ~ 7540586 (+) |
| G17234 | NA | other | downstream | 2418342 | 8032124 ~ 8032483 (+) |
| G17353 | NA | other | downstream | 3602240 | 9216022 ~ 9228859 (+) |
| G17354 | NA | other | downstream | 3620681 | 9234463 ~ 9240677 (+) |
