igfbp6b (igfbp6b,LOC107714992,LOC107664167,LOC107593959,LOC107697925,LOC107599019,LOC105912701)


Basic Information

Item Value
gene id igfbp6b
gene name igfbp6b,LOC107714992,LOC107664167,LOC107593959,LOC107697925,LOC107599019,LOC105912701
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 18120295 ~ 18123704 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224711.1
ATGGAGAACCTGAGACCCGGACGCAAGATGTCTTTCCTTTCCAACTTGACGCCCGTTGTCCTGTTGCTGATCTACAGTGGATCCTGGTCTTTGGCGGGTCGCTTGGGCCCCCACAAGAACTGCCTGAGCTGCAAAGACGGGCACCCTTCGGGCGTGGGCCGGGCCTCCAGGGACCCGGCCGGGGTGCCCAGCACCACTGTGCTGGCGTCGGGGGAGCCCTGCGGGGTTTACACTCTGAGCTGCGCCAAGGGGCTTCGCTGCGTGCCCCCTCCACGTGAACACAGCCCCCTTCAGGCTCTGCTGCAGGGCAGAGGCTTCTGCGCCAAACAGAGCAGAACCAGTCCCACCGAGAGGCCCCGCCCCACAGGGCCACATCCTTCAAATAGCGGTGAAATAGACAAGGCTCCATGTCGTAAGCTGCTCAACACTGTCCTGCGAGGTCTCGAGCTCACCATTTTCCAGTCCGATCGAGACATCTACATCCCAAACTGCGACACTCGTGGGTTCTACAGGAAAAAGCAGTGTCGGTCTTCTAAGGGCATGCAGCGTGGCCACTGCTGGTGCGTCGATGAGATGGGCAACACCGTGCCATCACGTGCCGGGGAGGATGGCATTTTACCATGTGATGGAGAGTGAGGGGAGCGACGGCCCCGCAGCTCTGAGcctggaggaagaggaggggtACAGGGAGAGGGGATGACTTCAGCTCGGTGCAAGACACTGCCTGACCAGGACACACCAGGGATAAACCACTTCACATGGGAACGGGCCCTCACTCAGAACGTCCAGACCACGTTCACTGCCATAAACtcgaaaaaaaacagcatcagaACACAGAAATAATGACCACTACACCACATGAGCTTAAGCTGGGATAGGTCAGCTGTTACAGAGAGGTATTTCATTCCTGGCCACAACTCCTACGTTTGTTTCTCAATGGGCTGTTTAACTTTTAAGCAGATGGGGTGACGTCCCCTCTCCCCTTCTCCAATGATACACTGACTAAACTATACTTATGAAAATGGAATATACCTTTGCGTCTAATTTATTCTGGAGCATTACTAAATTTCCTTGAATCGTTTCCTCAAAGACTTGCATACTTTTGAATCGTACACATTGTCATGTAATCGACATCTAAACGCTATCATAATATGCACATTTGGGAAGTACTCCTTTTTTTCGTTCATATACGACACTGACCGCAAACACACATCGTGGATTATTTGTACATAAGTGAGGTTATTGTGGTTGGTTGTGTCATGAGGTGGAATATTCTTGAATGCTGATGGCTGTTACCTTTTTCGAGAAGTTGTTaggcatatttttatatatttcaatatgctattttatatatatatatatataaaatatatataaattgttgatttatttaatgaactACAATgccatgtatttttatattgtcagCAGTTTTTCATTGTCAAAACAGagcttattttatttgctaaaacaGTGAGCGCCATGTGTTGGTGTCACCATAAAAAgggattaaaaacaaaaatacaatttaaacacACCCTTAAGAGCATTTACTGCtgtacatgtgttttttttatatataatttgtattattttatgtcattatttatgtCGATATGTTGATTCTTAGGTATTGGAAAGTGTTAGTATATcgcttaatttttaatatttctgattGTATTCTGGGTATTTTGTTCAGAACTCTGTGTTTTCTCATTCCCAAAATGCATTGAGAAAAAGTGCACAAAATAATGTCTGATCAATGTATCTCACACTGATTTTGTTGTATCAATATATGTGCCAGTAGTTGTGGGCCCTTGAAACGGAGCCcattggaaaaaataaaataaaataacgtgTGCAAGaactatgataaaaaaataaataaatgaataaaataaacggatacagagaaaaataaatgcatatgttaATATAAA

Function

symbol description
igfbp6b Predicted to enable fibronectin binding activity; insulin-like growth factor I binding activity; and insulin-like growth factor II binding activity. Predicted to be involved in regulation of insulin-like growth factor receptor signaling pathway. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including eye; gill; heart; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in obesity. Orthologous to human IGFBP6 (insulin like growth factor binding protein 6).

NR:

description
PREDICTED: insulin-like growth factor binding protein 6 paralog B2 isoform X1

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG:

id description
K23579 IGFBP6; insulin-like growth factor-binding protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224711.1 True 1940 mRNA 0.44 4 18120295 18123704

Neighbor

gene id symbol gene type direction distance location
pip4k2ca pip4k2ca,LOC107714989,LOC107598997,LOC107664235,LOC107697923,LOC107593957 coding downstream 3969 18107885 ~ 18116326 (-)
gpr182 gpr182,LOC107664254,LOC107697920,LOC107593955,LOC107706991,LOC107599064 coding downstream 15175 18102311 ~ 18105120 (-)
tspan31 tspan31,tsn31,LOC107599072,LOC107593953 coding downstream 49332 18065270 ~ 18070963 (-)
LOC122329235 LOC107714952,LOC107664261,LOC107594045,LOC107599127,LOC107706987,LOC107697913 coding downstream 182716 17935574 ~ 17937579 (-)
LOC122329192 cptp,LOC107706969,LOC107697856,LOC107664144,LOC107599683,LOC107594044 coding downstream 194091 17924639 ~ 17926204 (-)
lima1a LOC107714990,LOC107664165,LOC107593956,LOC107706995,LOC107697921 coding upstream 38756 18162460 ~ 18177490 (-)
copz1 copz1,LOC107664248 coding upstream 90874 18214578 ~ 18220380 (-)
hoxc3a LOC107714998,LOC107593965,LOC107664206,LOC107697835,LOC107706962 coding upstream 191129 18314833 ~ 18316762 (-)
hoxc4a hoxc4a,hoxc4,LOC107664204,LOC107714997,LOC107598886,LOC108433407,LOC103034018 coding upstream 192933 18316637 ~ 18330701 (-)
hoxc5a hoxc5a,LOC107664112,LOC107593967,LOC107664111,LOC107697940,LOC107715000,LOC107706972,LOC107598908 coding upstream 215345 18339049 ~ 18341234 (-)
G158882 NA non-coding downstream 76819 18041910 ~ 18043476 (-)
G158892 NA non-coding downstream 104418 18012126 ~ 18015877 (-)
G158887 NA non-coding downstream 118605 17999833 ~ 18001690 (-)
G158774 NA non-coding downstream 176135 17943925 ~ 17944160 (-)
LOC122328377 NA non-coding downstream 276193 17799842 ~ 17844102 (-)
G158947 NA non-coding upstream 69266 18192970 ~ 18193557 (-)
G158946 NA non-coding upstream 70548 18194252 ~ 18194524 (-)
G158948 LOC107599665,LOC107664257,LOC107714993,LOC107697859,LOC107706997 non-coding upstream 71695 18195399 ~ 18196369 (-)
G158949 NA non-coding upstream 77063 18200767 ~ 18200966 (-)
G158950 NA non-coding upstream 79332 18203036 ~ 18203452 (-)
march9 march9,LOC107593952,LOC107664138,LOC107714987,LOC107706970,LOC107599679,LOC107697857,LOC107088728,LOC108433385,LOC103130462,LOC105930772 other downstream 61556 18045926 ~ 18058739 (-)
coq10a si:dkey-190g6.2,LOC107671896,LOC107715030,LOC107598614,LOC107697969,LOC102210977,LOC108425511,LOC102797363 other downstream 697778 17413703 ~ 17422517 (-)
G158609 NA other downstream 776910 17339267 ~ 17343385 (-)
slc48a1a slc48a1a,LOC107671836,LOC107598487,LOC107594008,LOC107756371,LOC107697869,LOC107757747 other downstream 935910 17176625 ~ 17184385 (-)
G158336 LOC107716221,LOC107570608,LOC107586536,LOC106567035 other downstream 1761590 16355369 ~ 16358705 (-)
hnrnpa1b hnrnpa1b,LOC107664187,LOC107714994,LOC107707002 other upstream 107939 18231643 ~ 18235536 (-)
hoxc1a LOC107598919,LOC107707004,LOC107697929,LOC107594049,LOC107664160,LOC107714959 other upstream 172342 18296046 ~ 18302575 (-)
hoxc6a hoxc6a,LOC107593966,LOC107664205,LOC107714999,LOC107706971,LOC107697939,LOC107598897 other upstream 218630 18342334 ~ 18350347 (-)
G159076 LOC107715021,LOC107664216,LOC107593990,LOC107598736,LOC107697953,LOC107707026 other upstream 623687 18747391 ~ 18754712 (-)

Expression


Co-expression Network