mapre1b (mapre1b,LOC107559863,LOC107681395,LOC107666429,LOC107551545,LOC107727025)


Basic Information

Item Value
gene id mapre1b
gene name mapre1b,LOC107559863,LOC107681395,LOC107666429,LOC107551545,LOC107727025
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 6622854 ~ 6633347 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224761.1
CGTGATGACGCAAGACGCCCTAAGAACAAACCGACGCATGATCTGAGAGAAAGAGGCGCCGGCGAACGAGAGGACATGGCTGTGAACGTATATTCCACCTCAGTGACTAGCGACAATCTGAGTCGCCATGACATGCTTGCGTGGATCAATGAGTCTCTACAGATGAACTTTACCAAGATTGAGCTTTTATGTTCAGGTGCAGCCTACTGCCAGTTTATGGACATGCTGTTTCCGGGCTGCATACCTTTGAAGAAAGTTAAATTTGGTGCAAAGTTAGAGCATGAATACATTCACAATTTTAAGATATTGCAGGCTGCCTTCAAGAAAATGGGCGTTGACAAAATTATCCCGGTGGACAAGTTGGTAAAGGGCAAATTTCAAGATAATTTTGAATTTGTTCAGTGGTTTAAGAAGTTCTTTGATGCCAACTATGACGGAAAAGATTATGACCCAGTGGAAGCTCGACAGGGTCAGGACACCATGCCTCCACCCAACCCCTCCATGTCTGCCCTCAGCAAACCCAAGAAGATCATGAATGCAGCACCACAGAGAGCAGCCGTTGCCAAGGTAACACCCAAAATGGCTCCTGGCTCTGCGCGGAGACCCGGTGCTGGCGGTGATGAGGAAAGGGCAGAGCTTGTCCAAGAGTTAAACATCTTGAAGTCTACAATCCAGGACATGGAGAAGGAGCGGGACTTTTACTTTGGCAAACTGAGGAACATTGAGCTGATCTGTCAAGAGAAGGAGGGGGAGGGAGACCCCACCCTGCAGAGGATTGTGGATATTCTCTATGCCACAGACgagggGTTTGTCATACCAGACGCTGAGTCAGAGGACCAGGAGGAGTTCTAATGCTCACGACTCGCTGCAGTTTTCCCCTCCTCACCTCTCCATTCCCGTCCTCTTCACACAGTCACTACCCTGCCCTCCACACTtcatattatgcattttggaCTTCCGAACAAACTCCATACCGAACCCCATTGCGTCTGCTAAAAGCATGCATAGACACACTTCATGTCGACAGAACTGTTTTAATGCCCTCAGACCTCTGGCTGCCACGATACTCCTGTTTCTCTCCGAGGAAGAGTGTGTTTCCCGTCTGTAATATACAATCTAATATTGCTTTCCTCTTTCAGACacctgtaaatgtatttatcttaTTTGAAATGTCTTGGACACATCCTCTGTAGTGATTGATAGGCGGCGTCTCCCCACCCTCACTGCTGCGGTACATATCTGTGATCACGTCTTACTCCGTACCGTACCTTACTGACACGAAACCGAGGGACGGAATGACAAAACGTGCGTTAGTTCACCGCAGAACCCCTCTCGCTTCCTAGTTTCCACTCATGGTTTTGGTGCTTGCTTTAGCATAAGGCAGGTAGCAGTCACCACCGCTCCAGTCTATCCTCAGTGACTGTGCCTTATACAGACTGTCTGGAGGGAGTGGACCCAGTCTGacgtttcttttctttattttatggaTATAGTGAAGCGTCGTTTTCAAGTCGACGCGCGTACTAACACTCAGTTCGTGCGCTTTGGCCTGCAGGACGCCAGTGGACTGCGGCACCACGGTTGCAcgagtttaaatgtttttattataattttattgctttctttttaaagaatgatCCGTATGAAGTTAGTAGCCACTACGTTGGCGGACTCGGCCAAAATTTGAGTTGACAAGACAAACACTGCCCgttttcttctctgttttaCTGCCTTATATTTAATGCGTTTTTCTGTCCTTTCCTTCGCAATGTCTCTCTTGGCGAATGTTTGTAATTCAagttattaaagttttaaatttaagttttcttttgttCCTTATAATTATTTGTAGGTCGTAGCGGCGGCAGCGGAAAATTGGTTATTTCAGACCTGAATCTTTTAAGGACACGAGATTAGTTCTTTTAAAATCTTGCACTCTTTCAAGACCATTCCCCAAATAACCATGTCAggcaaaaacactaaaaataccCAGTAAATGAGCTTTGTAGATGAAAGCTTTACTTCTCGCTTGTTTTCTGGAAGATACGCGTTTGATCTTTCCAGACAATGCTCGCTCACTTCATTTGTCGTTTTTAGGAGATTCAACATGATTCTGACTTTAGATCACTGTGCCAACTCTGACTTTCTCCGACGCGTAGCTTCATTGTTTTCACGTGCACCGGTCATTTTCAATCGATAGCAGATCTTCTGCGTGTAGTTCTCAATGTTACATTCTACGTCAATAGCACATGCAAACCCGGCAATCAGAGTTGTTATTGGTGCTATCGAATACCTTGACCCTTAAGAATTTGCCTGTTTGAGCTAGACGAGCCTCTTTGCTGGATGTTTTGATTCACTGGATAAGACGCATTGCTGCAGTTGGGTGAATATAACAGTGCTGGATCTGGTCTAAATAGGAGACAATATAGGACAACAAGTGACACTCACATTTCTGGGCTTGCATTGACAAATATCCCATTGTAATTTCACATAAGCCGAACTGCTAAATATTGGCACTAGGTGGATGGATGCAAGTAAAAATGTGGAAGGAAGTAGTTTGGAAGCAGGTAATGTCTGTTAAAGGCAGCGATTGacccttccttcctttctttcaaTGCTCTGTGGCCTTTAAGAACAATCTGTAGCGAAGGTACTCAGTACATTGTGGGCCCCGCACCACGACCaaactgtctctctctccctgatTTTGTACTTGCAGGCTGTTAAGAGTTCCACATTTTTAACTGAAGTCCATTTCttacaataaaacagtatttacaTGTC

Function

symbol description
mapre1b Predicted to enable microtubule plus-end binding activity. Predicted to be involved in protein localization to microtubule plus-end; regulation of microtubule polymerization or depolymerization; and spindle assembly. Predicted to act upstream of or within cell division. Predicted to be located in plasma membrane. Predicted to be active in microtubule cytoskeleton. Orthologous to human MAPRE1 (microtubule associated protein RP/EB family member 1).

NR:

description
PREDICTED: microtubule-associated protein RP/EB family member 1-like isoform X3

GO:

id name namespace
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10436 MAPRE; microtubule-associated protein, RP/EB family

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224761.1 True 2784 mRNA 0.45 7 6622854 6633347

Neighbor

gene id symbol gene type direction distance location
prkcbp1l LOC107551546,LOC107681388,LOC107727017,LOC107666406,LOC107705695 coding upstream 444 6603646 ~ 6622410 (+)
plxnb1a plxnb1a,LOC107551544,LOC107726992,LOC107705653,LOC107666389,LOC107681368,LOC107559853,LOC108275501,LOC105889750 coding upstream 33253 6525611 ~ 6589601 (+)
krt5 LOC107727021,LOC107551543,LOC107681386,LOC107559866,LOC107705699 coding upstream 108761 6509691 ~ 6514093 (+)
krt8 krt8,LOC107681390,LOC107551542,LOC107705700,LOC107666368 coding upstream 132783 6485428 ~ 6490071 (+)
foxp1a foxp1a,LOC107727024,LOC107681376,LOC107568046,LOC107705705,LOC107666297 coding upstream 252869 6338411 ~ 6369985 (+)
lama5 lama5,LOC107681381,LOC107727012,LOC107666435,LOC107705651 coding downstream 7531 6640878 ~ 6708667 (+)
soga1 LOC107727023,LOC107705691,LOC107681366,LOC107666465 coding downstream 97469 6730816 ~ 6772986 (+)
oprl1 oprl1,LOC107727003,LOC107681404,LOC107666560,LOC107705672,LOC106572940 coding downstream 826151 7459498 ~ 7487536 (+)
myt1b myt1b,LOC107690850,LOC107747484,LOC107681384,LOC107559484,LOC107558231 coding downstream 1050957 7684304 ~ 7765052 (+)
LOC122328639 LOC107707759,LOC107559486,LOC107747485,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950 coding downstream 1132876 7766223 ~ 7773972 (+)
G155371 slc16a7,LOC107727020,LOC107559865,LOC100699719,LOC102785214,LOC101478097 non-coding upstream 20771 6601409 ~ 6602083 (+)
LOC122328814 NA non-coding upstream 140701 6461319 ~ 6482153 (+)
G155360 NA non-coding upstream 163825 6458558 ~ 6459029 (+)
LOC122328815 krt18,LOC107681396,LOC107727028,LOC107551541,LOC107666358,LOC107568050,LOC107705701 non-coding upstream 165045 6384561 ~ 6457809 (+)
G155372 NA non-coding downstream 2534 6635881 ~ 6637488 (+)
G155454 NA non-coding downstream 69826 6703173 ~ 6705526 (+)
G155455 NA non-coding downstream 70164 6703511 ~ 6707259 (+)
LOC122328803 NA non-coding downstream 87023 6720370 ~ 6723864 (+)
LOC122328804 NA non-coding downstream 91690 6725037 ~ 6728210 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other upstream 24322 6592602 ~ 6598532 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other upstream 1787370 4817365 ~ 4835484 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other upstream 2925832 3694652 ~ 3697022 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other upstream 3525819 3060509 ~ 3097035 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other upstream 3612837 2995169 ~ 3010017 (+)
G155561 NA other downstream 592647 7225994 ~ 7238919 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other downstream 665013 7298360 ~ 7305534 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other downstream 1688358 8321705 ~ 8333376 (+)
G155799 NA other downstream 1854739 8488086 ~ 8488641 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other downstream 2307684 8941031 ~ 9101372 (+)

Expression


Co-expression Network