idh3g (idh3g,LOC107737522,LOC107591068,LOC107673097,LOC107716150,LOC107593912,LOC108425561)


Basic Information

Item Value
gene id idh3g
gene name idh3g,LOC107737522,LOC107591068,LOC107673097,LOC107716150,LOC107593912,LOC108425561
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14286961 ~ 14293566 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224951.1
TCCGGAACCTTTCTCCAAGAGTCGGTGTTTAGTCCGGAACACAACGCACACGTAGACTGCTGTCATGATGGCCACTCTTACTAAAGCTTTAAAACCGATTTTGGGAAGGCAGTTGGGAAATACAGCAAAGGTTTTTGGCGCAGCAGTCAACAGTCAAAGAGGAAAGCCTACATACACAGGACGAATCATACCTCCTCCTGCCAAGTATGGAGGTCGGCATACTGTAACATTGATTCCTGGAGATGGGATCGGACCGGAACTGCTTAACCATGTGCGGGAGCTCTTCAGGTTCAGCTGTGTTCCTGTGGACTTTGAGGTGGTGCATGTGAATTCTGCATCAACCAGTGAGGACGACATCAATAACGCCATTACGGCCATTCGCCGCAATGGAGTTGCTCTTAAAGgtaACATTGAGACTAACCACGTAATGCCCCCTAACCACAAATCACGGAACAATCTTCTACGcacgAGTCTGGATCTGTACGCCAATGTGATGCACTGCCAGTCACTTCCTGGTGTTCAGACGCGCCACAAAAACATCGACATCATCATCATTAGAGAAAATACAGAGGGCGAGTACAGCAGTCTGGAGCATGAGAGCGTATCAGGAGTTGTAGAGTGTCTGAAAATCATCACACGGAACAACTCCCTCCGCATCGCTGACTATGCCTTCAGACTGGCCCGAGAGAAAGGTCGCCGCAGGGTCACGGCTGTCCACAAGGCTAACATCATGAAACTGGGGGATGGGCTGTTCTTGCAGTGCTGTAAGGAAGTGGCCTCTGGATACCCAGACATTGAGTTTGATAGTATGATTGTGGACAACACCACCATGCAGcTTGTTTCCAAGCCCCACCAGTTTGATGTCATGGTGATGCCTAACCTCTATGGCAATGTGGTCAGCAATGTGTGCGCCGGGCTGGTGGGTGGACCCGGGCTGGTGCCTGGTGCCAACTACGGGCGAGACTACGCCGTGTTTGAAACGGCCACCAGGAATACAGGAAAGAGCATTGCCAACAGGAACATTGCCAACCCCACTGCCATGCTGCTTGCCAGCTGTCTCATGTTAGATCATCTCAAACTCCATGACTACGCCAACATGATCCGCGGTGCGATCCTTACCACCATGAACGAGACCAGGTTGCACACAGTTGACATTGGGGGTCAGGGCACTACCTCAGAAGTGGTCCAGTCTATCATGAGGCTCATCCAGAGCAGCGGTCCCCTCACCACTGAGATCTAAACCCAGCCTGCACCACTCCACCACTGTTTGACATCAGCTACTTAAGGACATCTGCACTTCATTTTATGTCTCAATAATGTTGCTTCCACTTGAGACGAGAGATTTATTCTTGAATCCAGCAGCTTTTATGGGGATCTGGGGTGAAGATGGTGTTACGTGAAACACAACTTACTTCAGCGCTGTGATTGTGGTGTTTCTTGGGCATAGCGGTCTCTCCATGGGTTTTTAGATTTATCATTTTGTATGTAAAAGGTTATATTGTTTCAATGCTATGCTAATGCAGTATTTATGATGAGGGTCTTGCGTTGGATTTGTGTTTCTGCTGCTCAGTTGCATTCCACATTTTATCCATCTTACCTGTTATTCTCAAACCTTATaccttttttgtttactttaatgACCCTGAACAAAGCTCCAACTGGccatttacataattacattatacTTGTATAAACTACAgcgttttactttttttttttaactgcctTAAACTGTTGGGTGTTTAAATGGACTTCCTATTCTGGATGTCTATGAGATGGTATTTTTCTTTAGACTTTATGCTGGGGTATTTATGATTAATACTTAATGTTGGTCTACTGTTGCATCAGTAAGTTTGGACGTTTATGTTTTAGTTCTGTCTGTTCTGCAGTGCTTAAACGTATTTGACAAGTCTGCATCTGGCATGCTGTCATCttttgcattaaacattttccaACAGTTTTTCAGATTGGTATTAGAATATTGTAAAGCTGCGGGTCTCAACCTTTTTGCATCAAGACTACCACTATCCcatattcagttttattacatttttaattttctgataAAATATATCACAACTTGGAATAAACAGACCAACGTATATACAATGTGTGACTTTTACAGGTCtagaaatcacatttttaacgTTTTAATTGTACACTGGTTGAGAAAGGGTTAAAATTTGGACTGTTGCACAAATCCTTAATGGCTCACTGGTAATCCAGAGATATAATAAAATGGTTGTCctcttaaaaa

Function

symbol description
idh3g Predicted to enable NAD binding activity; isocitrate dehydrogenase (NAD+) activity; and magnesium ion binding activity. Predicted to be involved in isocitrate metabolic process and tricarboxylic acid cycle. Predicted to be active in mitochondrion. Orthologous to human IDH3G (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma).

NR:

description
PREDICTED: isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial isoform X1

GO: NA

KEGG:

id description
K00030 IDH3; isocitrate dehydrogenase (NAD+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224951.1 True 2257 mRNA 0.44 14 14286961 14293566

Neighbor

gene id symbol gene type direction distance location
avpr2aa avpr2aa,LOC107591070,LOC107737524,LOC107687451,LOC107716149,LOC107673055,LOC108436342 coding downstream 14501 14257850 ~ 14272460 (-)
syt6a syt6a,syt6,LOC107673111,LOC107591076,LOC107593918,LOC108433426,LOC107737664 coding downstream 90274 14150523 ~ 14196687 (-)
sdf4 sdf4,LOC107591077,LOC107673072,LOC107716138,LOC107687443,LOC107593920 coding downstream 182735 14100397 ~ 14104226 (-)
ctdsp2 ctdsp2,LOC107593922,LOC107716136,LOC107673073,LOC107687442 coding downstream 192525 14085586 ~ 14094436 (-)
tmem240a tmem240a,tmem240,LOC108275582,LOC107593924,LOC107687438,LOC107673083,LOC105898995 coding downstream 246883 14031726 ~ 14040078 (-)
lrp1ab lrp1,lrp1ab,LOC107673053,LOC107593902,LOC108425568 coding upstream 135406 14428972 ~ 14524636 (-)
senp1 LOC107673065,LOC107568405,LOC107737512,LOC107716163 coding upstream 261248 14554814 ~ 14563800 (-)
LOC122328465 LOC107737694,LOC107673066,LOC107568406,LOC107668342,LOC107564659,LOC107716177 coding upstream 270898 14564464 ~ 14569658 (-)
ada ada,LOC107574722,LOC107737507,LOC107673052,LOC107716171,LOC107564650,LOC107695842 coding upstream 330687 14624253 ~ 14636325 (-)
gdi1 gdi1,LOC107564645,LOC107737502,LOC107673075,LOC107716167,LOC107574690 coding upstream 378711 14672277 ~ 14679231 (-)
G157885 NA non-coding downstream 43006 14242581 ~ 14243955 (-)
G157880 NA non-coding downstream 49947 14236352 ~ 14237014 (-)
G157875 LOC107673069,LOC107737697,LOC107593917,LOC107591119,LOC107716140,LOC107687444 non-coding downstream 143031 14143662 ~ 14143930 (-)
G157874 NA non-coding downstream 144793 14141939 ~ 14142168 (-)
G157863 NA non-coding downstream 211024 14057837 ~ 14075937 (-)
G157901 NA non-coding upstream 9306 14302872 ~ 14343270 (-)
G157905 LOC107668334,LOC107716153,LOC107737519 non-coding upstream 31150 14324716 ~ 14325647 (-)
G157906 NA non-coding upstream 32818 14326384 ~ 14461017 (-)
G157915 LOC107673099,LOC107737518 non-coding upstream 63474 14357040 ~ 14359030 (-)
G157920 NA non-coding upstream 72993 14366559 ~ 14367629 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other downstream 53910 14222809 ~ 14233051 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 1004634 13280256 ~ 13282327 (-)
G157367 NA other downstream 1069553 13141078 ~ 13217408 (-)
G156985 NA other downstream 2362311 11922844 ~ 11924650 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 2485329 11799922 ~ 11801632 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 33400 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 276781 14570347 ~ 14589622 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 391324 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 753586 15047152 ~ 15048344 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other upstream 1053851 15347417 ~ 15474390 (-)

Expression


Co-expression Network