G16020


Basic Information

Item Value
gene id G16020
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5695628 ~ 5695857 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17916
AAAAGTAGTCCACAGTACTAGTTTAATTCACTGCACTTATAAATTCCTCCATTATAACTACAAATAACTACAATCATTATCATGTGGATATTCGGTTAAGTCTGACGTCATGCGGCAGCGCTTCCAGGTCCAAACGTTCTATCTTATACCACAAGAAAACAACAAACGGTGCTAATATACACACATGATGTGGTGTAATATTACAAAAAAATTATAATCATAACCTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17916 True 230 lncRNA 0.33 1 5695628 5695857

Neighbor

gene id symbol gene type direction distance location
CI01000001_05587090_05591952 APOBEC2B, APOBEC2 coding upstream 103490 5587090 ~ 5592138 (+)
CI01000001_05581818_05584137 NA coding upstream 111007 5581818 ~ 5584621 (+)
CI01000001_05579315_05580553 CCDC115 coding upstream 114925 5579315 ~ 5580703 (+)
CI01000001_05565644_05568075 NA coding upstream 127140 5565644 ~ 5568488 (+)
CI01000001_05498507_05500723 NA coding upstream 194512 5498210 ~ 5501377 (+)
CI01000001_05734513_05735964 NA coding downstream 37264 5733121 ~ 5736013 (+)
CI01000001_05795264_05798555 ATP6AP1LB coding downstream 99407 5795264 ~ 5799834 (+)
CI01000001_05803416_05809184 SLMAPB coding downstream 107559 5803416 ~ 5809306 (+)
CI01000001_05814686_05836203 NA coding downstream 118789 5814646 ~ 5837238 (+)
CI01000001_05838017_05841551 ABHD6B coding downstream 142160 5838017 ~ 5841683 (+)
G16019 NA non-coding upstream 96 5695309 ~ 5695532 (+)
G16018 NA non-coding upstream 2218 5693133 ~ 5693410 (+)
G16017 NA non-coding upstream 7009 5688296 ~ 5688619 (+)
G16016 NA non-coding upstream 9683 5685603 ~ 5685945 (+)
G16015 NA non-coding upstream 11489 5683938 ~ 5684139 (+)
G16021 NA non-coding downstream 3135 5698992 ~ 5699321 (+)
CI01000001_05689002_05702184 NA non-coding downstream 6145 5688655 ~ 5702684 (+)
G16023 NA non-coding downstream 8392 5704249 ~ 5704461 (+)
G16024 NA non-coding downstream 10027 5705884 ~ 5706186 (+)
G16025 NA non-coding downstream 10921 5706778 ~ 5707104 (+)
CI01000001_05279884_05287123 NA other upstream 405672 5279837 ~ 5287698 (+)
G15794 NA other upstream 630924 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2074177 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 4024624 1667762 ~ 1671167 (+)
G13051 NA other upstream 4650476 1043713 ~ 1045152 (+)
G15995 NA other downstream 16028 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 1836715 7531541 ~ 7540586 (+)
G17234 NA other downstream 2336267 8032124 ~ 8032483 (+)
G17353 NA other downstream 3520165 9216022 ~ 9228859 (+)
G17354 NA other downstream 3538606 9234463 ~ 9240677 (+)

Expression


Co-expression Network