LOC122329171


Basic Information

Item Value
gene id LOC122329171
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2955109 ~ 2956917 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225370.1
TCTAACCTAACGCTACTTTAGCGCTTTTGTCCACAGAGTTCACAGTGATCACAGGTCAGGATGAGCGCGCGAGCGTACTGCTCGCTCATTGCAGTTTTATTGTGTCTCTGCAGATGTTTGAGCATAACCGATGCTACTCGAGGACGCTCCAAAGTGACTGGTTTCTGTCCGGCGAGGCTCACGGTTGTACCGTTCCGTCAAGGATGTTCATCTGACAGAGACTGCTCCAGAAAACACATATGCTGTCGTTTTGATCGTGGCCCTGTGTGTGTGCCGCCTGTTTCCACAAAACCAGGAGAGTGTCCACCTGCCAAAATGTGTGGAAGAAAATCATGTACCAGTTCTTGTGGAAGTGACTCTTGCTGTCCAGGCAACGAGAAGTGCTGCAGCAATGGATGTGGACATCACTGTACAGATCCATATATAGTGAAACCGGGTCAATGTCCCAGACCAACGAGGAGTCGAGTGTGTGATGAACGCTGTTTCCATGATGGCCAGTGTCCTGCCAGACAGAAGTGTTGCCCAACCACCTGTGGCCGTTCATGCAGTAAAGCATTTGGCCAGGGACGTGGGGGAGACCAAGGTGACGGACAGGGACGTGGGGGAGACCAAGGTGACGGACAGGGTGGTGGTGGTTGGGGACGTGGGGGAGACCAAGGTGACGGACAGGGTGGTGGTGGTTGGGGACGTGGGGGAGACCAAGGTGACGGACAGGGACGTGGGGAGACCAAGGTGACGGACAGGGTGGGGGCCAGGGTCAAGGTGGGGGCCAGGGTCAAGGTGTGGGCCAGGAGGGGCCAGGGCCAGGAGGAGGCCAGGGCCAGGGTCAAGGTGGCGGCCAGGAGGGGGGGGCCAGGGTCAAGGTGGAGGACAGGGACAGGGTGGCAGCCGGGGAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225370.1 True 900 mRNA 0.58 5 2955109 2956917

Neighbor

gene id symbol gene type direction distance location
LOC122328870 NA coding upstream 3481 2948990 ~ 2951628 (+)
LOC122329170 NA coding upstream 7254 2946012 ~ 2947855 (+)
LOC122329167 NA coding upstream 16391 2923380 ~ 2938718 (+)
LOC122328848 LOC107709248,LOC107687290,LOC107558915 coding upstream 37561 2901814 ~ 2917548 (+)
cdh26.1 LOC107687291,LOC107709249,LOC107748449,LOC107565965,LOC107558905 coding upstream 55319 2885732 ~ 2899790 (+)
LOC122328851 LOC107687290,LOC107709248,LOC107558915 coding downstream 8683 2965600 ~ 2976846 (+)
LOC122328866 LOC107709226,LOC107576631 coding downstream 26421 2983338 ~ 2989016 (+)
rhoac rhoac,LOC107687289,LOC107558917,LOC105890655,LOC108438067,LOC102777028,LOC106572042 coding downstream 32598 2989515 ~ 2993355 (+)
twist3 twist3,LOC107696972,LOC107748453,LOC107554215,LOC107576512,LOC107704622,LOC107709223 coding downstream 176614 3133531 ~ 3137978 (+)
LOC122328845 LOC107554212,LOC107697038,LOC107571185,LOC107673381,LOC100001805,LOC107752455 coding downstream 362524 3319441 ~ 3352334 (+)
LOC122328888 NA non-coding upstream 16028 2938721 ~ 2939081 (+)
G154369 NA non-coding upstream 103661 2851024 ~ 2851448 (+)
G154368 NA non-coding upstream 109954 2844852 ~ 2845155 (+)
LOC122328886 LOC107748448,LOC107680059,LOC107565963 non-coding upstream 112087 2835863 ~ 2843022 (+)
G154365 NA non-coding upstream 157272 2797127 ~ 2797837 (+)
LOC122328882 NA non-coding downstream 54264 3011181 ~ 3021971 (+)
LOC122328883 NA non-coding downstream 92481 3049398 ~ 3051276 (+)
G154487 tmem106c,LOC107704621 non-coding downstream 155605 3112522 ~ 3113171 (+)
G154517 NA non-coding downstream 249565 3206482 ~ 3206688 (+)
G154561 NA non-coding downstream 285298 3242215 ~ 3242722 (+)
LOC122329169 NA other upstream 11303 2925308 ~ 2943806 (+)
prdm5 prdm5,LOC107698519,LOC107669703 other upstream 598382 2312722 ~ 2356727 (+)
LOC122328869 LOC107723021,LOC107694620,LOC107577481 other upstream 822276 2129998 ~ 2132833 (+)
LOC122328880 LOC107723010,LOC107683284,LOC107694619 other upstream 883710 2068668 ~ 2071399 (+)
snai1b LOC107694621,LOC107723015,LOC107549169,LOC107558792,LOC107738552,LOC107669687 other upstream 901134 2050032 ~ 2053975 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other downstream 38252 2995169 ~ 3010017 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other downstream 103592 3060509 ~ 3097035 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other downstream 737735 3694652 ~ 3697022 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other downstream 1860448 4817365 ~ 4835484 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other downstream 3635685 6592602 ~ 6598532 (+)

Expression


Co-expression Network