aldh3b1 (aldh3b1,LOC107698763,LOC107601228,LOC108444046,LOC108258475)


Basic Information

Item Value
gene id aldh3b1
gene name aldh3b1,LOC107698763,LOC107601228,LOC108444046,LOC108258475
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13103276 ~ 13107847 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234624.1
GCCGGTTTTTCGGGCTGCAGTACGACTTAAAGATACCAAACTCGACAAACTTGAattttctgaatgaaacgcGAAAACCCGGAACTCATCTTCACTCTTCACGTgttacagtgaaaaaaacattggGCTGTTCAAGTATTCTTGCTATGGAGGGCCAGAAACAGGTGCTGGAGAGGCTGCGGGGCTCTTTCCGCTCGGGTGTGACCCTTCCTGTCCACTTCCGGTTGACTCAGCTGCAGGCCATGATGTCGCTGTTTGAAGACAATGAAACCCAGATTTTGCAGGCAATGCATGACGACCTTGCTAAGCCCAAGTTTGAGGCAGTGCTGTCAGAGATTGATATAGTGGTGAATGACCTTTGCTACACCATCAGCAACCTGCAAACCTGGATGCAGCCCACTTATGTGGGCACGAACTTGGCAACAAAGCTGGATGACTGTTTTGTACGCAGGGAGCCATTAGGTGTTGTTTTGATTATTGGAGCATGGAACTATCCTCTTCAGCTAATTTTGGCACCTTTGATTGGTGCGATTGCTGCAGgTAACTGTGCTATTCTGAAGCCATCGGAAATAAGTCGAGCAACCGAAAAGCTTCTTGCTGAACTCATTCCTAAGTACCTGTCCCAGGACTGTTATGCAGTCATTTGCGGTGGAGCAGAAGAGACCAAGACATTGCTGGAGAATAGATTTGATCATATCTTCTACACAGGATCGCAGTCGGTGGCTCGTTGCATCCTGCAGGCCGCAGCGGTGCACCTCACCCCAGTTACTCTGGAGCTGGGCGGAAAGTGCCCCTGTTTGATATATGGCCGGCTAGACATGAGAGCTGCTGCAAAGAGGCTGGTGTGGGCCAAGTTTTTCAATGCCGGGCAGAGCTGTGTAGCTCCAGATTATGTTTTATGCACTGCTGAGACGAGAGACATGCTGCTACCTCTTATAAAAGAGGCTCTAGAGGGTTTCTACGGATCCGAGCCCCAGCAAAGCCAAGACATGGGTCGTATTGTGACAGACAGGCACTGGGACCGACTGGTTGAGCTGCTAAAAAAGTCTAAGGGAAAGATAGTGATAGGAGGAGAGAGTGACAAAAAGGCCAAGTACATTGCCCCCACTGTGCTCGTTGATGTCAAGGAGTCAGACGCTTTAATGCAGGAGGAGATTTTTGGCCCCATCCTCCCCATTCTGACCATCAAGTCTCTCGATGAAGGAATCGATTTCATGAACGAGAGGGAAAAGCCGCTGGCGCTCTACGCTTTCTCTGATGAGTCTCaggTTGTCACTACAGTTCTTGAGAGGACCAGCAGCGGAGGCTTCTGTTCAAATGATGGAATAGTTCACATGACCCTCTCTGGATTACCCTTCGGAGGAGTTGGTGCCAGTGGGATGGGTAACTACCACGGTCGCTGGGGCTTTGAGACGTTCAGTCACAAGCGTGGCTGCATGCTGAGGGGCTGGGCTCTGGAGCGCGTCAACGTGCTGCGCTACCCCCCCTATAAAGAAAGCAATCTCAGCTGGCTGCGCTGGGCCACCACCGCCAAGAAGAAGGGGTGGGCAGGATGTTCTGTTATGTGACGCTCGCATTGAGGAtggccaatttttttttttttttttttcaattgcgaTATCATGCAAAACACCACCAGAGGTCAGTATTGAGAAAGGTTGCTTCTTCTGGATACTTCTGTTGTGAGAGAAAAGAGGCCATTTActagcaaaattattttaactacCATTGTTCAAATACACTACTCATGGGCTTATTTgcatctgaattaaaaaaaatccagtctttcataaaacaaattatcCATACTTGTTATTGAACACTAAGGTGAAAAGCATTACATTATTTAGTAAGGTAATGTAGCATCTTTACTGTTACAATTGAATTACTGCTAccataaacatgtttttctatAGCAGTAGCTCGTACTATTTGAGGGTTATTCtattgaaatatgaaatatatcgAAAAATCTCAAGTACCATTTCTAGTTTGAGTTGTATACTTGTCTGATTTTTATCTTCAGAGTtgagtacaaaaataaaatgagacaaACATGTTTGCCCCCGCAGAAAA

Function

symbol description
aldh3b1 Predicted to enable 3-chloroallyl aldehyde dehydrogenase activity. Predicted to act upstream of or within cellular aldehyde metabolic process. Is expressed in EVL; ectoderm; epidermis; peripheral olfactory organ; and pharynx. Orthologous to human ALDH3B1 (aldehyde dehydrogenase 3 family member B1).

NR:

description
PREDICTED: aldehyde dehydrogenase family 3 member B1-like isoform X1

GO:

id name namespace
GO:0006081 cellular aldehyde metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity molecular_function

KEGG:

id description
K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234624.1 True 2076 mRNA 0.46 10 13103276 13107847

Neighbor

gene id symbol gene type direction distance location
LOC122332118 alkbh7,LOC107723204,LOC107690706 coding upstream 128649 12972477 ~ 12974627 (+)
LOC122332168 gtf2f1,LOC107737737 coding upstream 203060 12895326 ~ 12900216 (+)
alkbh7 NA coding upstream 331094 12770572 ~ 12772182 (+)
ier2a LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 coding upstream 423519 12678396 ~ 12679757 (+)
LOC122329583 nacc1,LOC107690702,LOC103910274,LOC107737738,LOC107689628,LOC107554144,LOC107723200,LOC103025552 coding upstream 426613 12661681 ~ 12676663 (+)
carm1 carm1,LOC107698604,LOC107689626,LOC107753277,LOC107724424 coding downstream 8184 13116031 ~ 13129608 (+)
timm29 zgc:110046,LOC107736790,LOC107601237,LOC107698646,LOC107753167,LOC107689699,LOC107578239 coding downstream 26823 13134670 ~ 13136750 (+)
slc25a23b slc25a23b,LOC107601238,LOC107698653,LOC107724434,LOC107689624,LOC107753149,LOC105898533,LOC108444036 coding downstream 46660 13154507 ~ 13162307 (+)
znf207a znf207a,LOC107590415,LOC107698690,LOC107601239,LOC107689623 coding downstream 56149 13163996 ~ 13170254 (+)
dlx4a dlx4a,LOC107709990,LOC107689696,LOC107590410,LOC107753083,LOC107688148 coding downstream 278581 13386428 ~ 13391506 (+)
G19629 ighv4-5 non-coding upstream 6422 13005810 ~ 13096854 (+)
G19626 NA non-coding upstream 10636 13088254 ~ 13092640 (+)
G19628 LOC107710248 non-coding upstream 21122 13077933 ~ 13082154 (+)
G19624 NA non-coding upstream 26582 13072133 ~ 13076694 (+)
G19636 NA non-coding upstream 30677 13061117 ~ 13072599 (+)
G19711 NA non-coding downstream 12786 13120633 ~ 13214815 (+)
LOC122330830 NA non-coding downstream 32435 13140282 ~ 13152319 (+)
LOC122341519 NA non-coding downstream 64192 13172039 ~ 13173224 (+)
G19722 NA non-coding downstream 118712 13226559 ~ 13227185 (+)
G19757 NA non-coding downstream 236648 13344495 ~ 13351575 (+)
LOC122332158 LOC107583070,LOC107737766 other upstream 115363 12835381 ~ 12987913 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other upstream 574473 12519837 ~ 12528803 (+)
G19326 NA other upstream 589555 12511926 ~ 12513721 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other upstream 788230 12303364 ~ 12315046 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other upstream 853279 12232427 ~ 12249997 (+)
si:dkey-204f11.64 LOC105898698 other downstream 4630 13112477 ~ 13114856 (+)
rbbp6 rbbp6,LOC107689611,LOC107710004,LOC107590402,LOC107601255,LOC107688097,LOC107720072 other downstream 590690 13698537 ~ 13710865 (+)
slc16a3a si:ch211-234h8.7,slc16a3,LOC107720094,LOC107688105,LOC107590394 other downstream 888114 13995961 ~ 14002378 (+)
G19973 NA other downstream 941643 14049490 ~ 14053032 (+)
G20015 cog1,LOC107721521,LOC107601277,LOC107654497,LOC107590385,LOC107688115,LOC107719994 other downstream 1010620 14118467 ~ 14119570 (+)

Expression


Co-expression Network