CI01000003_01126525_01129929 (ADIPOQB)


Basic Information

Item Value
gene id CI01000003_01126525_01129929
gene name ADIPOQB
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1126098 ~ 1130325 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_01126525_01129929.mRNA
CCATAAATACATCTAGACTTGGATAAATATAGTTCAGAGAAGCCCTCAGTGATGACAGTACATTTCCAACAAAGGCAGTTGCGCTGCTCAGTTGTTGTTCTTACTTTTCTGTGCTTTGGGGACACACACACATACAGACCAGGTAAGAAAGACATTCTCATAACACAAGAGTTACATAACATTGCTTTAATATAGAGACTCTATATCAGAAAAGAACAGGTCAAGCGTGTCTGGTTTGACATGGCACTAAAATGTTTTGGCATTTCCAAAGCCATTTGCATCAAGAAGTTTAGATTAGGGATTAGGTTATAATATTGTGTTCTAATTCATGACAAAAAGTCAAACAATTCACAATTTCTAAAGTGTGTCATCTCAAGTTTTATATAAGATGTACAATACATAGTATTAGTTTATGTAGCAGGATAACATGGTTATTAAATTCTTGAATATTTCATTTGACATCAGTATGACGCTACTGTGGAAGATCTTATTGGGAATCATTCTCATTGGGCGACTTGGTCAAGGTCAAGACCTATTAGAGGAATCTTTAGAGCGAATAGCAGTGGATGAAGGGGCTGAGGAGGGAGGAGAAGAGGTTGAAGAGCCTGAGGGTCCAGGGGCAGATGCCACTCAACCTGATGATAGACAGCCATGTGCCATGTGGATGGGAGGCGTTCCTGGTACACCTGGGCACAGTGGAAAACCTGGGAGAGATGGCAGAGATGGGCATGATGGACCGAGGGGCGAGAAAGGAGATAAAGGTGAAGCAGGTGAGAAAGGAGATACTGGACAGAAGGGGGATGTCGGTCCTGCTGGGCCGAGAGGCTTTCCTGGAAACCCAGGTCTGAAAGGTGCCCGTGGGGACAGTGCCTTGTCTTACCATTCAGCCTTTAGCGTAGGTCTCAGTGAACTTGTTCCCGCCACTAACTTTCCAATCCGCTTCAACAAGTTCTTCTACAACGACCAGCACCACTATGATGATGTTTCTGGAAAGTTCCGCTGCGTTCTACCAGGGGTGTACTTCTTCACGTATCATCTAACCGTCTACACTAAAGATGCTAAAGTCAGTCTCTACATGAATGACAAGGCTATCATGTTCACCTATGACCAGTACCAGGAAACCAATGTGGATCAGGCATCAGGTTCTGTTATCTTGCGTTTGGAGGCAGGAGATGAGATATGGCTGCAGGTCTATGGAGATGAGGGGTTTGGGGGAGTGTATGCAGATAACACCAACGACTCCACCTTTTCCGGTTTCCTCCTGTATCCTGCAATTCCTGCTCCTGCACAGAGACATTGACAATATCTTAAATCAGGGCTATCAAGCTTAGTTCATGGAGGCCCACAGCCCTGGAGAGTTTAGTTCAACCCTAATTAAATCTACACTCTAAAAAAAATGCTGGGTTGTTTCAACCCAAATTTGGGTCAAATATGGACAAACCTAACCGTTGGGTTAAAAGTTTAATTAAAAAATTTAACCCAACGGCTGGATTTATCCATATTTGACCCAAATTTGGGTTGAAACAACCCAGCATTTTTTAGAGTGTACATTTAATTAGGGTCGAAGCTAAACTCTGCAGGGTTGTGGGCCTCCATGAACTAAGTTTGAACTAAGTTTGTGTGTTGAAGCAGGGTTGGGACTAAACTTTGTAGGACTGTGGTCCTCCAGGAATTGAGTTTAACACCCCTGTCCTAA

Function

symbol description
adipoqb Predicted to enable hormone activity. Predicted to be located in extracellular region. Predicted to be part of collagen trimer. Is expressed in several structures, including adipose tissue; ball; liver; notochord; and pancreas. Human ortholog(s) of this gene implicated in several diseases, including carcinoma (multiple); cardiovascular system disease (multiple); non-alcoholic fatty liver disease; primary open angle glaucoma; and type 2 diabetes mellitus. Orthologous to human ADIPOQ (adiponectin, C1Q and collagen domain containing).

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG:

id description
K07296 ADIPOQ, ACDC; adiponectin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_01126525_01129929.mRNA True 1696 mRNA 0.43 2 1126098 1130325

Neighbor

gene id symbol gene type direction distance location
CI01000003_00981851_01059504 TMTOPSA coding upstream 66594 981851 ~ 1059504 (+)
CI01000003_00842413_00868623 TNK2 coding upstream 257435 842413 ~ 868663 (+)
CI01000003_00747650_00802075 NA coding upstream 323417 746547 ~ 802681 (+)
CI01000003_00731635_00742538 TFR1A coding upstream 383489 731200 ~ 742609 (+)
CI01000003_00665762_00716862 DLG1, DLG1L coding upstream 408719 664961 ~ 717379 (+)
CI01000003_01140472_01168860 NA coding downstream 10017 1140342 ~ 1168900 (+)
CI01000003_01258265_01259530 NA coding downstream 127940 1258265 ~ 1259551 (+)
CI01000003_01280201_01309764 NA coding downstream 149442 1279767 ~ 1310125 (+)
CI01000003_01329453_01342093 NA coding downstream 199128 1329453 ~ 1342672 (+)
CI01000003_01356590_01360272 NA coding downstream 226152 1356477 ~ 1360348 (+)
G23039 NA non-coding upstream 55590 1070290 ~ 1070508 (+)
G22641 NA non-coding upstream 196951 928942 ~ 929147 (+)
G22625 NA non-coding upstream 212304 913534 ~ 913794 (+)
G22615 NA non-coding upstream 229769 896121 ~ 896329 (+)
G22605 NA non-coding upstream 243166 882605 ~ 882932 (+)
G23056 NA non-coding downstream 46505 1176830 ~ 1222662 (+)
G23175 NA non-coding downstream 197238 1327563 ~ 1327875 (+)
G23217 NA non-coding downstream 214948 1345273 ~ 1345574 (+)
G23223 NA non-coding downstream 247734 1378059 ~ 1378355 (+)
G23242 NA non-coding downstream 355857 1486182 ~ 1486398 (+)
G22578 NA other upstream 200850 924803 ~ 925248 (+)
CI01000003_00390997_00406970 WDR33 other upstream 730884 390622 ~ 408312 (+)
G22420 NA other upstream 936659 179531 ~ 189439 (+)
CI01000003_01863421_01867859 NA other downstream 732943 1862854 ~ 1868137 (+)
G23870 NA other downstream 1150335 2280660 ~ 2285641 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016101 adipoqb coding NC_007113.7 CM002886.2 4490604 ~ 4496358 (-)