CI01000003_01356590_01360272


Basic Information

Item Value
gene id CI01000003_01356590_01360272
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1356477 ~ 1360348 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_01356590_01360272.mRNA
GTATAAGAGCCCAGGAGAAATATGACCTGCTCTTTTTATATTAGGCCTATATGTTACAGCGCACATCTCCTCGCCACCAGATGTGCAGATGAGTGCACAACTCTTCAGTAGTCATGGTGTCCTACATCACAGACTGCATTGAAAAGCCCATACGGATGTGTTTTGAACGTTTCGGTAAGTTCGTAGGGCTTCACCCGTGGTGGTTTGTCACTTTACCGCTGGTGGTGTCCGCAGGTCTCGGAGGAGGATTTTACTTTCTGAATGACCTGAAATCCAACGACATAGTGGAGCAGTTTACTCCGAAAAACGGCCGCGCTAAAGTGGAGAGGCGTTTCTTTCAAGAAACTTTTCCACAAATTGACTCACAGTTTTCAATTATACGATTAATCACTGACGGGGTTTTTGCATCTTTGATATTCTCCTGTCAGACAAACATACTCAGTGTTGCTGCACTAGAGGAGGTCATCCGCATCGATGGACAAGTCAGAGGAATCACCGCAACTTACGACGCACAACAATTTTTGTTCTCGGATATTTGCGCGAATGTGAACGGAACATGCAACTCTAACGTAATGCTTGATGTTTTAAATTATAATGCAAGCAACATTAATTTTGTCAACATAACGTATCCTGAGTACTGTCCGTCCGAATTCAAATGTCTCCACATGGGAAATGTCATCAGTGAGGTGGAGGTGGATCACAATGGAGTTGTTCAAAGTGCCAAAGCAATGAGACTTTTCTATTATTTAAAAGAGAGCAATAAAACACTGGGAGAAGCCTGGCTTCAAGAGTTGATAGACTTTCTGTCGAATGTAACGACCTCTGCAACAGAAGTATCCTATTTTACCTCCATGTCAAGACAACAGGAGTTTGAGAAGAGTACCCAATCTGTCACTGAACTTTTTGCAATTACTTACTTTCTTGCCATCTCATTTTCAGTAATATCTTGCCTGAGGTTTGACAATGTGAGGAATAAAGCGTGGGTGGCTTCTCTTGGAGTTTTTTCCACTGCACAAGCAGTGCTGTCCAGCTTCGGGCTGCTGTTACTCATGAATGTGCCATTTGTTATTACTGTGGCATCTTCTCCATTCCTGATTCTTGGAATCGGTATCGATGACATGTTTATCATGATCTCCAGCTGGCAACGAACCAACATTCAAGACACAGTGCCAGACCGTATGGCTGATACCTACAGGGAGGCAGCCATTTCCATTACTATCACCACCCTGACTGACGTGCTAGCCTTCTACCTCAGCTATGGTAACCCCTTTGGCTCAGTTCAGTCTTTCTGTTTTTATGCGGGCACGGCCATCTTGTTCTGCTACTTCTATAACATCACTTTCTTTGGAGCTTGTCTGGCTCTGAATGGCAGAAGGGAGGGGGCGAACAGACACTGGTTAACTTGCATGAAGGTCCCAGAGGAGGTCCCACCAGGACGGTCTAAAGCATACGCTGTCTGCTGTCTCGGAGGATCTTACAACCATGACACAGGAACCGAGGAAGAGCACCCAATGACATTGTTCTTCAGGAAGTACTATGGACCATTTTTGACAACAGTTTGGAGTAAAGCAATAGTAGTTTTTATCTACTTAGTATACATTGCTGTTAGTGTTTATGGCTGCCTGCAGCTCAAGGAAGGCATTGATCTCAAGAACCTAGCACTTGATAAGTCCTACATTGTCCAATACTATGAGGCTGAGAAGACATACTTTCATTATCATGGCCCAAATGTAATGTTAGCCATCAATGGCACATTTCCATATTGGGAGGAGAATGAACGTAATCAACTTGAGTCTTGTATTATGCAATTTCAGGAACTGAATTCTGTCAAGAACTTGTCCACATCTTGGCTTCATTCCTTCGAAAAGCATGCAGAGGAACATGGTAATAACATCAGCACAGAAGCTACATTTAAAACACATCTGTATCAGTTTTTGGACCACCATCCAGTGCTCAAACAGGATGTCAACATAACCAATAATGACATAGTTGCTTCACGTCTGTTTCTTCAGACAATTGTTCAGAACTTCACAGAGAAGAACATGTTGAACTCACTACGGAAGAGAGCAGAGAGCTGCCTGTGTCCACTGTTGGTCTACCATCCAGCGTTTATATACCACGATCAGTATACTGTAATAGGGCATATCACTCTTCAGACCGTCACGGTGGCAACCGCAGTAATGCTGGCCATCTCTCTTGTGCTGATTCCAAATCCTCTTTGCGCCTTGTGGGTGGCCTTTGCAATTGCTTCAGTTATTTTGGGAGTCACCGGCTTCATGGCACTGCTAAACATTAGCCTTGATTCAATCTCCATGATAAACTTGGTCATTAGCATCGGCTTCTCCGTGGACTTCTCTGCTCATATCTCCTATACGTTCGTGTCCAGTACTAAGCCCGATGTGAACGAGAGAGTTGTGGAGGCACTGACGCACCTGGGCTACCCCATACTTCAAGGGGCTCTTTCTACAATTGTGGGTGTGGTGGTACTTTCAGCTTCCAGTAGCTACATATTCAGAACCCTCTTCACCATCGTGATGCTAGTCATTACTTTTGGGTTGCTTCATGGTATCGCTTTTATTCCAGTATTTCTTACTTTCTTTGGATTTTGCCACAAGTTGCAGCAGCACTGAATTTAAATATTAAACTAATTTTCTTCAAATCTCCTCTCTAATTTTTAATTTAATTGTAAAATTATCATTTTACTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_01356590_01360272.mRNA True 2706 mRNA 0.43 4 1356477 1360348

Neighbor

gene id symbol gene type direction distance location
CI01000003_01329453_01342093 NA coding upstream 13805 1329453 ~ 1342672 (+)
CI01000003_01280201_01309764 NA coding upstream 46352 1279767 ~ 1310125 (+)
CI01000003_01258265_01259530 NA coding upstream 96926 1258265 ~ 1259551 (+)
CI01000003_01140472_01168860 NA coding upstream 187577 1140342 ~ 1168900 (+)
CI01000003_01126525_01129929 ADIPOQB coding upstream 226152 1126098 ~ 1130325 (+)
CI01000003_01382733_01410162 MIB1 coding downstream 22100 1382448 ~ 1410190 (+)
CI01000003_01430247_01451033 NA coding downstream 69899 1430247 ~ 1451626 (+)
CI01000003_01489211_01493471 GATA6 coding downstream 127489 1487837 ~ 1494025 (+)
CI01000003_01561017_01590804 CABLES1 coding downstream 200565 1560913 ~ 1590923 (+)
CI01000003_01728663_01761628 MMP16B, MMP16 coding downstream 368104 1728452 ~ 1762479 (+)
G23217 NA non-coding upstream 10903 1345273 ~ 1345574 (+)
G23175 NA non-coding upstream 28602 1327563 ~ 1327875 (+)
G23056 NA non-coding upstream 133815 1176830 ~ 1222662 (+)
G23039 NA non-coding upstream 285969 1070290 ~ 1070508 (+)
G22641 NA non-coding upstream 427330 928942 ~ 929147 (+)
G23223 NA non-coding downstream 17711 1378059 ~ 1378355 (+)
G23242 NA non-coding downstream 125834 1486182 ~ 1486398 (+)
G23244 NA non-coding downstream 144201 1504549 ~ 1504981 (+)
G23246 NA non-coding downstream 147902 1508250 ~ 1508470 (+)
G23251 NA non-coding downstream 181781 1542129 ~ 1542436 (+)
G22578 NA other upstream 431229 924803 ~ 925248 (+)
CI01000003_00390997_00406970 WDR33 other upstream 961263 390622 ~ 408312 (+)
G22420 NA other upstream 1167038 179531 ~ 189439 (+)
CI01000003_01863421_01867859 NA other downstream 502920 1862854 ~ 1868137 (+)
G23870 NA other downstream 920312 2280660 ~ 2285641 (+)

Expression


Co-expression Network