CI01000003_01982406_01992219


Basic Information

Item Value
gene id CI01000003_01982406_01992219
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1982336 ~ 1992844 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_01982406_01992219.mRNA
GTATATATACAGCAGTCTTACCTCTGTTCGCTTGACAGTTTATCCGCATTTGGTTCACCCGTTTGCTATGATGTCTCAAATTCAACTCCTCCCATCTGACGACGAGTTCAGCTCTTCTCCTGATCCTCCGCCGCAATCAGCCGGCCCCAGGACCACTCCTTCTTCACCAGATACTGCCACCAAGCGCAAGCGGGCGCCAGCCTGCTCAAGCAGCCACTCGCTTGCTAAGACGCCCAGGCCTACCCTCATCACCACCGTGGCCTGCAGCTCCAGCAGCACAAGCAAGCGTGAGGCTACCTCCACTTGCAACACAGACCTTCTCAGTCTTTTCCTCCATGTCCCTCTTACACTTCTCTCAATCTCCCTCCTCAAGCCCCACAGGCCGACTCAACTTTCTCCTAAATACAAAATCACATCATTCTCTGTTCACTTCTCTGTTCACAGCAACTCCGAAGCCCGTCCCATCAAATGCTGTCGCCTCGGAACCACCCCCAGTGGCTCACAACATCCGAGCACAGATCCTGGCAGATGCTGCGAGAGCCCTCCCGGTCAAGCGTCTATGCTTTCTCTTTCTCTGTCCGGTGAGGCTTACCCATCCGATGCAATGAGTCTTGATTTCCCGTCGGACGCCACGAGAGCCCTCCTGGTCGAGCATCCATGTTTTCTCTGTCTCCGTCTGGCAAGGCATACCCGTCCGATGCAGAGCTCGTTTCTCCATCCAAAGTGCTTCCACTGCCGAAGCAGTGTCATTTCCTTCGCTCATGCAGGAGCTCGCCCACGCAAGACCATCCCCAGTCAACTACCAACGAGGCTCACCCATCTGATGCCATGACCACCAAACTCCCGTCTGATGTTGCAAGAAGCCCTCCCGATCCAGCGACTAACCCCCTCCCTACGATTGGCACACCATCAGCTTTGCACTCTGCAAGTTTTGGGGTTTTATCAGCATCTTTTCTGGGGGAGTACTCTGGGTTCGTGCCAAATACTGGGAATGGAGCCCTCTCCTTGGACAGCACGCCAAATATGCTTAACATTTACTCTAGCTGACTTATTTGTAAGTGTGAACTCATGAAATGATGTTTCATTAACAAAGTTCGGGAGGAACACATGCGAATAATCTATCCAGTCAACTTGTCATCAGCAATTACCACGTCTATCCTATCAGTATGAGAGGAAGCCTATGTGTACACCTACATTCCTCAACAGTTTTCAGCATCCCTCCACCACCCCGACTCCTCACTCTTGGCTTGTTCCTACCACAGTAAGGAATACGGGGGGAGTACTCTGGGTTCGGGCCAAATACCGGGCACGGAGCCCTCTGCCAAATATGCTTACCGTTTACTCTATCTGACTTATTTGTAAGTGTGAACTCATGAACTCAACTAACTTGTGGGGAAAGTTTTGTAGCCTATCCCATAGTCATTGTTCCTAACCTTTCTCTTAGTTAAATCTCTTTA

Function

NR:

description
hypothetical protein cypCar_00012617

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_01982406_01992219.mRNA True 1457 mRNA 0.51 5 1982336 1992844

Neighbor

gene id symbol gene type direction distance location
CI01000003_01969544_01973134 COPE coding upstream 9202 1969330 ~ 1973134 (+)
CI01000003_01956459_01966449 SLC25A24L coding upstream 15881 1956401 ~ 1966455 (+)
CI01000003_01921110_01928830 TXNDC12 coding upstream 52715 1920837 ~ 1929621 (+)
CI01000003_01907347_01909263 NA coding upstream 72736 1907122 ~ 1909600 (+)
CI01000003_01893593_01901539 SCHIP1 coding upstream 80567 1893593 ~ 1901769 (+)
CI01000003_02070747_02072861 NA coding downstream 77903 2070747 ~ 2073389 (+)
CI01000003_02101903_02151773 NA coding downstream 107971 2100815 ~ 2151976 (+)
CI01000003_02175343_02190917 ST6GALNAC5, ST6GALNAC5A coding downstream 181946 2174790 ~ 2193320 (+)
CI01000003_02259112_02344710 AK5 coding downstream 266268 2259112 ~ 2344710 (+)
CI01000003_02422051_02446833 FAM73A, MIGA1 coding downstream 429207 2422051 ~ 2446837 (+)
G23383 NA non-coding upstream 2743 1979029 ~ 1979593 (+)
G23379 NA non-coding upstream 28629 1953337 ~ 1953707 (+)
G23323 NA non-coding upstream 123122 1858488 ~ 1859214 (+)
G23322 NA non-coding upstream 124835 1855877 ~ 1857501 (+)
G23326 NA non-coding upstream 127168 1854305 ~ 1855168 (+)
G23356 NA non-coding downstream 36688 2029532 ~ 2047851 (+)
G23770 NA non-coding downstream 146444 2139288 ~ 2139544 (+)
G23771 NA non-coding downstream 146701 2139545 ~ 2139868 (+)
G23787 NA non-coding downstream 207850 2200694 ~ 2200936 (+)
G23789 NA non-coding downstream 214261 2207105 ~ 2207635 (+)
CI01000003_01863421_01867859 NA other upstream 114199 1862854 ~ 1868137 (+)
G22578 NA other upstream 1057088 924803 ~ 925248 (+)
CI01000003_00390997_00406970 WDR33 other upstream 1587122 390622 ~ 408312 (+)
G22420 NA other upstream 1792897 179531 ~ 189439 (+)
G23870 NA other downstream 287816 2280660 ~ 2285641 (+)

Expression


Co-expression Network