G22438


Basic Information

Item Value
gene id G22438
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 219647 ~ 219859 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25306
AGCTGTCCAAAGTTGCACTCATGTTTATGCTAATAACTTTTGAATCGTAAGGGTTAGAAACAAAAATCGATTGCACCCTATGACGTCATTTCCGTCATGAAAATTTTTCCGCCATTTTGAATTTTCTGAAAAACCTACTTTTTCAAACTCCTCCTTGGCCTTTACTCCGATTTTCACGAAAATTGAACCAGATCATCTTCAGACCATGCCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25306 True 213 lncRNA 0.38 1 219647 219859

Neighbor

gene id symbol gene type direction distance location
CI01000003_00157111_00159800 NA coding upstream 59403 156863 ~ 160244 (+)
CI01000003_00011191_00013812 NA coding upstream 205749 11191 ~ 13898 (+)
CI01000003_00007611_00010967 NA coding upstream 208680 7611 ~ 10967 (+)
CI01000003_00266342_00275005 NA coding downstream 46483 266342 ~ 275312 (+)
CI01000003_00323130_00336023 CLDN15LA coding downstream 103008 322867 ~ 336168 (+)
CI01000003_00355244_00360638 SAGA coding downstream 135385 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 160635 380494 ~ 386091 (+)
CI01000003_00390997_00406970 WDR33 coding downstream 171038 390622 ~ 408312 (+)
G22437 NA non-coding upstream 1307 216612 ~ 218340 (+)
G22436 NA non-coding upstream 4954 214269 ~ 214693 (+)
G22435 NA non-coding upstream 6200 212182 ~ 213447 (+)
G22434 NA non-coding upstream 11725 207583 ~ 207922 (+)
G22433 NA non-coding upstream 12375 206981 ~ 207272 (+)
G22441 NA non-coding downstream 2154 222013 ~ 222783 (+)
G22447 NA non-coding downstream 7271 227130 ~ 229997 (+)
G22439 NA non-coding downstream 21930 241789 ~ 243643 (+)
G22425 NA non-coding downstream 56198 276057 ~ 276995 (+)
G22420 NA other upstream 30208 179531 ~ 189439 (+)
G22578 NA other downstream 704944 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1643409 1862854 ~ 1868137 (+)
G23870 NA other downstream 2060801 2280660 ~ 2285641 (+)

Expression


Co-expression Network