G22422


Basic Information

Item Value
gene id G22422
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 291102 ~ 291765 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25284
GCGCAAAGGCGGCCTTTGCCACTTGGAGGCCTGTTTTAGTGAAACAGTAGGAGAGCCCCCCTTTTAGAAAAACATTGTATGCAATGTGACTGCAGTTACTTTATTATCTCCGTTATAATGTTATCTCATATTTCACACTTAATAGACTATTAAAAAGCGAAAACAAAAACAGCATTCAATCTTCGTCACTCTCTTAACCCTTCAGCGAGCACCTTGGACAGCAAAATGACCAGGCATCGAGAGCAATAATAATTAGAGAACAGAGATAAGATAATGAATGTAACAGGAATTAGTACTAATACAATATGAATATGAAAAGAATTTGGCTTTCTGAAAACGGAGTGCTCCACAAACTCTACAAGTTTATCCTTATCCTTTATCCTTATCCAGCAATCTCATAACATTGTGTTCAAATGACAGCAAGTGCATACAGTCTTTCTTGCAGGATGCTGGACTGCAGGTATGATTTTATCAGCCGCAGACGCGAGATAGGCCTAGAGCTTAAATAGCCTACAATCTGCATTACCAAGATTAATCTTGGCCAAACAGTTAATCCTACCTCCAAAACTCACTCTGACCAACAAAACACTTAATATGTCTCAAAATAAGACAGTTAACACTGACAACAATTCTCATTCAGAAAACATACATGCCATTCATAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25284 True 664 lncRNA 0.38 1 291102 291765

Neighbor

gene id symbol gene type direction distance location
CI01000003_00266342_00275005 NA coding upstream 15790 266342 ~ 275312 (+)
CI01000003_00157111_00159800 NA coding upstream 130858 156863 ~ 160244 (+)
CI01000003_00011191_00013812 NA coding upstream 277204 11191 ~ 13898 (+)
CI01000003_00007611_00010967 NA coding upstream 280135 7611 ~ 10967 (+)
CI01000003_00323130_00336023 CLDN15LA coding downstream 31102 322867 ~ 336168 (+)
CI01000003_00355244_00360638 SAGA coding downstream 63479 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 88729 380494 ~ 386091 (+)
CI01000003_00390997_00406970 WDR33 coding downstream 99132 390622 ~ 408312 (+)
CI01000003_00413809_00414819 NA coding downstream 120825 412590 ~ 415156 (+)
G22421 NA non-coding upstream 398 290470 ~ 290704 (+)
G22425 NA non-coding upstream 14107 276057 ~ 276995 (+)
G22439 NA non-coding upstream 47459 241789 ~ 243643 (+)
G22447 NA non-coding upstream 61105 227130 ~ 229997 (+)
G22468 NA non-coding downstream 4290 296055 ~ 296973 (+)
G22472 NA non-coding downstream 12618 304383 ~ 304629 (+)
G22474 NA non-coding downstream 15227 306992 ~ 307226 (+)
G22475 NA non-coding downstream 15865 307630 ~ 307847 (+)
G22480 NA non-coding downstream 20732 312497 ~ 312705 (+)
G22420 NA other upstream 101663 179531 ~ 189439 (+)
G22578 NA other downstream 633038 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1571503 1862854 ~ 1868137 (+)
G23870 NA other downstream 1988895 2280660 ~ 2285641 (+)

Expression


Co-expression Network