G22475


Basic Information

Item Value
gene id G22475
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 307630 ~ 307847 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25346
AGCATTCTTATAAATGTAACAAAATACTGTTTGTATTTGTAAGTATAGACTCAAAGTCTGTGCACAGTGAACGCAATGAACAGGCTGCCAAGCAAAATACACTATCCAAGATAAGTTTGTGCAAGCAACTAATTGTCACATGAAATGTAAAGGTTTACCTTGATGGCAGAGGAATGTCTTGCAGGCAGTCACTGGACAACCACAGAACTAGAACTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25346 True 218 lncRNA 0.49 1 307630 307847

Neighbor

gene id symbol gene type direction distance location
CI01000003_00266342_00275005 NA coding upstream 32318 266342 ~ 275312 (+)
CI01000003_00157111_00159800 NA coding upstream 147386 156863 ~ 160244 (+)
CI01000003_00011191_00013812 NA coding upstream 293732 11191 ~ 13898 (+)
CI01000003_00007611_00010967 NA coding upstream 296663 7611 ~ 10967 (+)
CI01000003_00323130_00336023 CLDN15LA coding downstream 15020 322867 ~ 336168 (+)
CI01000003_00355244_00360638 SAGA coding downstream 47397 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 72647 380494 ~ 386091 (+)
CI01000003_00390997_00406970 WDR33 coding downstream 83050 390622 ~ 408312 (+)
CI01000003_00413809_00414819 NA coding downstream 104743 412590 ~ 415156 (+)
G22474 NA non-coding upstream 404 306992 ~ 307226 (+)
G22472 NA non-coding upstream 3001 304383 ~ 304629 (+)
G22468 NA non-coding upstream 10657 296055 ~ 296973 (+)
G22422 NA non-coding upstream 15865 291102 ~ 291765 (+)
G22421 NA non-coding upstream 16926 290470 ~ 290704 (+)
G22480 NA non-coding downstream 4650 312497 ~ 312705 (+)
G22481 NA non-coding downstream 4948 312795 ~ 313016 (+)
G22483 NA non-coding downstream 7728 315575 ~ 315803 (+)
G22484 NA non-coding downstream 8899 316746 ~ 317024 (+)
G22419 NA non-coding downstream 16834 324681 ~ 325522 (+)
G22420 NA other upstream 118191 179531 ~ 189439 (+)
G22578 NA other downstream 616956 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1555421 1862854 ~ 1868137 (+)
G23870 NA other downstream 1972813 2280660 ~ 2285641 (+)

Expression


Co-expression Network