G22480


Basic Information

Item Value
gene id G22480
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 312497 ~ 312705 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25351
GCTAGAAGAGAGTTTGTTGCCAATCCAGCAAATGATATTACTGTACCATATGACTGAATCTATACTGTAGTTGATCTTTACAGATGAAGGGTGAGTTACAGTAATGTGGCAGTCTCTACCATAGTAATCTGTTTACAGTATCACATGGCATACTATAATGTAAAACGATGCCATCTGTCTTCCTTCTTCTGATGCATCTCTGATCAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25351 True 209 lncRNA 0.38 1 312497 312705

Neighbor

gene id symbol gene type direction distance location
CI01000003_00266342_00275005 NA coding upstream 37185 266342 ~ 275312 (+)
CI01000003_00157111_00159800 NA coding upstream 152253 156863 ~ 160244 (+)
CI01000003_00011191_00013812 NA coding upstream 298599 11191 ~ 13898 (+)
CI01000003_00007611_00010967 NA coding upstream 301530 7611 ~ 10967 (+)
CI01000003_00323130_00336023 CLDN15LA coding downstream 10162 322867 ~ 336168 (+)
CI01000003_00355244_00360638 SAGA coding downstream 42539 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 67789 380494 ~ 386091 (+)
CI01000003_00390997_00406970 WDR33 coding downstream 78192 390622 ~ 408312 (+)
CI01000003_00413809_00414819 NA coding downstream 99885 412590 ~ 415156 (+)
G22475 NA non-coding upstream 4650 307630 ~ 307847 (+)
G22474 NA non-coding upstream 5271 306992 ~ 307226 (+)
G22472 NA non-coding upstream 7868 304383 ~ 304629 (+)
G22468 NA non-coding upstream 15524 296055 ~ 296973 (+)
G22422 NA non-coding upstream 20732 291102 ~ 291765 (+)
G22481 NA non-coding downstream 90 312795 ~ 313016 (+)
G22483 NA non-coding downstream 2870 315575 ~ 315803 (+)
G22484 NA non-coding downstream 4041 316746 ~ 317024 (+)
G22419 NA non-coding downstream 11976 324681 ~ 325522 (+)
G22501 NA non-coding downstream 43850 356555 ~ 356814 (+)
G22420 NA other upstream 123058 179531 ~ 189439 (+)
G22578 NA other downstream 612098 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1550563 1862854 ~ 1868137 (+)
G23870 NA other downstream 1967955 2280660 ~ 2285641 (+)

Expression


Co-expression Network