G22419


Basic Information

Item Value
gene id G22419
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 324681 ~ 325522 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25281
TATTGAGTGGATTCGGTTGTTATTTTACTCCTGTGACGATCGATGGGTGAATTACATCATTGTATTACTGGGAAGTGAATATCTGGATGTGGTCAGGTTTTTTTCCTGAGGGGAGATTGATTTTCTTTGATGGCGAGCCAACCTATTCGGACACTGGAAAAGAAAGAAGAAAATTCATCCTATAGGACCAGGAGAGTATCGTGATTTCATTTTTTTTTTTTTCCCTGCTCAAGGTAAAACTATTCCTGCATAGAGACTGTGTTTTCTCCATACGGGACTGAAAACTGTCTGAGATAACTAGAAGAAGGAACTGATATCAGTTATTGAACATTTGGAAATTGAACTGATCGTCGACGTGTGCGTGATATCACAAAATTGTTGTTGAATCTGGACAAATTGTTGTCATTCTATTGTTTTCTATTGTATTCATACTATTCTAGTGTGAAACTGACAGTGATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25281 True 460 lncRNA 0.31 2 324681 325522

Neighbor

gene id symbol gene type direction distance location
CI01000003_00266342_00275005 NA coding upstream 49369 266342 ~ 275312 (+)
CI01000003_00157111_00159800 NA coding upstream 164437 156863 ~ 160244 (+)
CI01000003_00011191_00013812 NA coding upstream 310783 11191 ~ 13898 (+)
CI01000003_00007611_00010967 NA coding upstream 313714 7611 ~ 10967 (+)
CI01000003_00355244_00360638 SAGA coding downstream 29722 355244 ~ 360793 (+)
CI01000003_00380494_00385991 PROC, PROCA coding downstream 54972 380494 ~ 386091 (+)
CI01000003_00390997_00406970 WDR33 coding downstream 65375 390622 ~ 408312 (+)
CI01000003_00413809_00414819 NA coding downstream 87068 412590 ~ 415156 (+)
CI01000003_00431473_00447759 MFN1A coding downstream 105951 431473 ~ 447950 (+)
G22484 NA non-coding upstream 7657 316746 ~ 317024 (+)
G22483 NA non-coding upstream 8878 315575 ~ 315803 (+)
G22481 NA non-coding upstream 11665 312795 ~ 313016 (+)
G22480 NA non-coding upstream 11976 312497 ~ 312705 (+)
G22475 NA non-coding upstream 16834 307630 ~ 307847 (+)
G22501 NA non-coding downstream 31033 356555 ~ 356814 (+)
G22506 NA non-coding downstream 47029 372551 ~ 372819 (+)
G22488 NA non-coding downstream 85041 410563 ~ 411612 (+)
G22490 NA non-coding downstream 125026 450548 ~ 451101 (+)
G22420 NA other upstream 135242 179531 ~ 189439 (+)
G22578 NA other downstream 599281 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1537746 1862854 ~ 1868137 (+)
G23870 NA other downstream 1955138 2280660 ~ 2285641 (+)

Expression


Co-expression Network