G22551


Basic Information

Item Value
gene id G22551
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 560920 ~ 561612 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25438
TCGCGTTGTTCCGCAGGGCTCCTCGCAAGTCGCGTCATGGAAGAACAATAAAGCGTCTTTGTTTCACTGCAGCTGACGAGTGGAAACGCTGAAGAGGCAGTGCACGATATAATGAACACAAAGAAAACACATGCCCGTTACACGCCGCATGTCGATAAAAAATAAGAATGATAACAGTGGTTTCTCATTTTATTCTGTTTCATTTGATTCTGCATATTCCCCATTTGAGATTGTAGCAAGTACCGGAAATGGACAGAGCAAGCCATTTTTGTCGTTTTTGATTTACATATTCTTTTGGATGCTTAAAAAAACAGTGTATTGTACAAGATACAATCAAATGAGCAGTAGCCTACCGTAATACCGTATTTGATCTGCGTTTTTGAAAAGTTTGTAAGCTTATGAGCTTTATTGTTAAACGTTGCTGAACAATGTTGAGCTGTTTGAATAAACACAAGGGTCTTCTTGTGATATCTGGCATTTAGTCTATAAGGTCATTCCAATTTGTAAAGAAATGTGAAAATCTTACTTTGTCCATAGGCCTACGTTTGGATGCTACACTGTTATCAGGTGGCCTATGACTCACATTTCCAGTGTACCATTATGTAAATAAACACTTTTATTGATTGATTTTTGCTAGTTATTAAGCTCTGTGCATTTGCAGTATCTTGAAGCACTTGAGAATGACATTTGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25438 True 693 lncRNA 0.38 1 560920 561612

Neighbor

gene id symbol gene type direction distance location
CI01000003_00538178_00547944 PHB2, PHB2A, PHB2B coding upstream 12937 538085 ~ 547983 (+)
CI01000003_00431473_00447759 MFN1A coding upstream 112970 431473 ~ 447950 (+)
CI01000003_00413809_00414819 NA coding upstream 145764 412590 ~ 415156 (+)
CI01000003_00390997_00406970 WDR33 coding upstream 152608 390622 ~ 408312 (+)
CI01000003_00380494_00385991 PROC, PROCA coding upstream 174829 380494 ~ 386091 (+)
CI01000003_00568546_00573291 NA coding downstream 6934 568546 ~ 573869 (+)
CI01000003_00596144_00607951 NA coding downstream 34532 596144 ~ 608038 (+)
CI01000003_00644619_00663181 NA coding downstream 82043 643655 ~ 663280 (+)
CI01000003_00665762_00716862 DLG1, DLG1L coding downstream 103349 664961 ~ 717379 (+)
CI01000003_00731635_00742538 TFR1A coding downstream 169588 731200 ~ 742609 (+)
G22544 NA non-coding upstream 38267 522149 ~ 522653 (+)
G22524 NA non-coding upstream 92018 468673 ~ 468902 (+)
G22490 NA non-coding upstream 109819 450548 ~ 451101 (+)
G22488 NA non-coding upstream 149308 410563 ~ 411612 (+)
G22585 NA non-coding downstream 20456 582068 ~ 582405 (+)
G22583 NA non-coding downstream 183069 744681 ~ 744938 (+)
G22574 NA non-coding downstream 256186 817798 ~ 819540 (+)
G22601 NA non-coding downstream 318019 879631 ~ 879868 (+)
G22602 NA non-coding downstream 318341 879953 ~ 880262 (+)
G22420 NA other upstream 371481 179531 ~ 189439 (+)
G22578 NA other downstream 363191 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 1301656 1862854 ~ 1868137 (+)
G23870 NA other downstream 1719048 2280660 ~ 2285641 (+)

Expression


Co-expression Network