G22615


Basic Information

Item Value
gene id G22615
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 896121 ~ 896329 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25522
TTGACCTTGGACTGTTACTCATTTCTGATTCTCTGCTGCCTGCCTTGACCCTTGCCTGTTCCCGGATTGTGTTTGCTGCCTGCCTTGGGACTTTGATTGTTTGCTGCCTACCCTGATCACTGTCTGTCACTGTTTCTGCCACTGGCTCATCCTTGCTATTGTTGTGTCTGTGAACTACACTTCAGTAAAAGCTGCAGATGGATCCTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25522 True 209 lncRNA 0.48 1 896121 896329

Neighbor

gene id symbol gene type direction distance location
CI01000003_00842413_00868623 TNK2 coding upstream 27458 842413 ~ 868663 (+)
CI01000003_00747650_00802075 NA coding upstream 93440 746547 ~ 802681 (+)
CI01000003_00731635_00742538 TFR1A coding upstream 153512 731200 ~ 742609 (+)
CI01000003_00665762_00716862 DLG1, DLG1L coding upstream 178742 664961 ~ 717379 (+)
CI01000003_00644619_00663181 NA coding upstream 232841 643655 ~ 663280 (+)
CI01000003_00981851_01059504 TMTOPSA coding downstream 85522 981851 ~ 1059504 (+)
CI01000003_01126525_01129929 ADIPOQB coding downstream 229769 1126098 ~ 1130325 (+)
CI01000003_01140472_01168860 NA coding downstream 244013 1140342 ~ 1168900 (+)
CI01000003_01258265_01259530 NA coding downstream 361936 1258265 ~ 1259551 (+)
CI01000003_01280201_01309764 NA coding downstream 383438 1279767 ~ 1310125 (+)
G22605 NA non-coding upstream 13189 882605 ~ 882932 (+)
G22603 NA non-coding upstream 15250 880621 ~ 880871 (+)
G22602 NA non-coding upstream 15859 879953 ~ 880262 (+)
G22601 NA non-coding upstream 16253 879631 ~ 879868 (+)
G22574 NA non-coding upstream 76581 817798 ~ 819540 (+)
G22625 NA non-coding downstream 17205 913534 ~ 913794 (+)
G22641 NA non-coding downstream 32613 928942 ~ 929147 (+)
G23039 NA non-coding downstream 173961 1070290 ~ 1070508 (+)
G23056 NA non-coding downstream 280501 1176830 ~ 1222662 (+)
G23175 NA non-coding downstream 431234 1327563 ~ 1327875 (+)
CI01000003_00390997_00406970 WDR33 other upstream 500907 390622 ~ 408312 (+)
G22420 NA other upstream 706682 179531 ~ 189439 (+)
G22578 NA other downstream 28474 924803 ~ 925248 (+)
CI01000003_01863421_01867859 NA other downstream 966939 1862854 ~ 1868137 (+)
G23870 NA other downstream 1384331 2280660 ~ 2285641 (+)

Expression


Co-expression Network