G23039


Basic Information

Item Value
gene id G23039
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1070290 ~ 1070508 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU25999
ACACGAACTAGTGGTGAGGAAAGCAGACTGCGGGGTTGGCTCACGTCAGCAGCATCTGGGTCCAAAGTTGCTCTGACACACCAAACCGATGCTCGACACCCGACGGCCAAGTAGCACGTCCGTTCTGCGCCAGCGTAAGAAGAAATTCCTTTCCGTACCAGCAGGTGGCAGTAGCTGAAGAGCCAATCAGAATGATCAGATGGCCTGACTGACGAGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25999 True 219 lncRNA 0.55 1 1070290 1070508

Neighbor

gene id symbol gene type direction distance location
CI01000003_00981851_01059504 TMTOPSA coding upstream 10786 981851 ~ 1059504 (+)
CI01000003_00842413_00868623 TNK2 coding upstream 201627 842413 ~ 868663 (+)
CI01000003_00747650_00802075 NA coding upstream 267609 746547 ~ 802681 (+)
CI01000003_00731635_00742538 TFR1A coding upstream 327681 731200 ~ 742609 (+)
CI01000003_00665762_00716862 DLG1, DLG1L coding upstream 352911 664961 ~ 717379 (+)
CI01000003_01126525_01129929 ADIPOQB coding downstream 55590 1126098 ~ 1130325 (+)
CI01000003_01140472_01168860 NA coding downstream 69834 1140342 ~ 1168900 (+)
CI01000003_01258265_01259530 NA coding downstream 187757 1258265 ~ 1259551 (+)
CI01000003_01280201_01309764 NA coding downstream 209259 1279767 ~ 1310125 (+)
CI01000003_01329453_01342093 NA coding downstream 258945 1329453 ~ 1342672 (+)
G22641 NA non-coding upstream 141143 928942 ~ 929147 (+)
G22625 NA non-coding upstream 156496 913534 ~ 913794 (+)
G22615 NA non-coding upstream 173961 896121 ~ 896329 (+)
G22605 NA non-coding upstream 187358 882605 ~ 882932 (+)
G22603 NA non-coding upstream 189419 880621 ~ 880871 (+)
G23056 NA non-coding downstream 106322 1176830 ~ 1222662 (+)
G23175 NA non-coding downstream 257055 1327563 ~ 1327875 (+)
G23217 NA non-coding downstream 274765 1345273 ~ 1345574 (+)
G23223 NA non-coding downstream 307551 1378059 ~ 1378355 (+)
G23242 NA non-coding downstream 415674 1486182 ~ 1486398 (+)
G22578 NA other upstream 145042 924803 ~ 925248 (+)
CI01000003_00390997_00406970 WDR33 other upstream 675076 390622 ~ 408312 (+)
G22420 NA other upstream 880851 179531 ~ 189439 (+)
CI01000003_01863421_01867859 NA other downstream 792760 1862854 ~ 1868137 (+)
G23870 NA other downstream 1210152 2280660 ~ 2285641 (+)

Expression


Co-expression Network