G23343


Basic Information

Item Value
gene id G23343
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1830478 ~ 1831444 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU26342
AAACGGCTAAAGACGTATCTTTTTTGTCAACACTCACCCATTAATACTAACACTTACTATTCTATTCTGTATATTTATTTATTTTTTATTTATTAAAAAACCTTGCTACATGTACTGTGCTAGACTAACAGGGACTAGTCACAGCACTTTCATATTGTTGCCCTATTGTTGGTTTGATTGCTTCTATTGTTCTCCTCATTTGTAAGTCGCTTTGGATAAAAGTGTCTGCTAAATGATTAAATGTAAATGTAGTATGAAAGAAATTTGGACGTACTACATCCGCCATGTTGTTATTGTCATGTGACCTACGACTGCAGGTTGTAGACTGCAGTTTTGTTGCTTCACTGCCATTCACAAATCCTCTCCTGCGGTCTTATGGGATAGTAATAGTTCATTGAATGCGCACTTCAGAATTTCGCCAGAAGTAGTAGGTCATCTGGGTACTTTTTGCCTACTATTTTTTGAATACTATGAATTTAGGCATACTATTTGGCTCACATATGGGCTGCGTCTGAAAACTGGAAAATGCTGCCTTCGGAGGACACATTTCAAGGTAGGAAGGCATCAAGGCACGTCCAAATCCAGTGTTAGCTTCACTTCCTGTTTCCTGAGATACCTTCATCTGATCTATTTTTGAAGGCAGCATAGATGAATCCTTTGCTGCCTTTGATATCCCATAATCCTGTGCTTTCCATTCTGTGAGAGTTCAGCTAGAAAAATAAAGCTGGCATCCAAAAGTTACGTTTGCTGGTCAGTTTGTGTGTAAATGTACGTTTTTGACCAAAGTCACGTGATTTCAGCAGTTTGGTGGTTTGACACGCGATCCGAATCATGATTCGACACGCTGATTCATTATGCTCCGAAGCTTCCTGAAGCAGTGTTTTGAAATCGGCCATCACTAAATAAGTCATTATTTTGTTTTTTTTGGCGCACCAAAAATATTCTTGTCGCTTTATAATATTAATAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26342 True 967 lncRNA 0.49 1 1830478 1831444

Neighbor

gene id symbol gene type direction distance location
CI01000003_01797491_01803265 PTER coding upstream 26094 1796621 ~ 1806332 (+)
CI01000003_01728663_01761628 MMP16B, MMP16 coding upstream 67999 1728452 ~ 1762479 (+)
CI01000003_01561017_01590804 CABLES1 coding upstream 239555 1560913 ~ 1590923 (+)
CI01000003_01489211_01493471 GATA6 coding upstream 336453 1487837 ~ 1494025 (+)
CI01000003_01430247_01451033 NA coding upstream 378852 1430247 ~ 1451626 (+)
CI01000003_01863421_01867859 NA coding downstream 31410 1862854 ~ 1868137 (+)
CI01000003_01889537_01891879 NA coding downstream 58054 1889498 ~ 1892071 (+)
CI01000003_01893593_01901539 SCHIP1 coding downstream 62149 1893593 ~ 1901769 (+)
CI01000003_01907347_01909263 NA coding downstream 75678 1907122 ~ 1909600 (+)
CI01000003_01921110_01928830 TXNDC12 coding downstream 89393 1920837 ~ 1929621 (+)
G23341 NA non-coding upstream 2636 1827481 ~ 1827842 (+)
G23339 NA non-coding upstream 4682 1825569 ~ 1825796 (+)
G23301 NA non-coding upstream 39752 1790370 ~ 1790726 (+)
G23304 NA non-coding upstream 102294 1727980 ~ 1728184 (+)
G23344 NA non-coding downstream 63 1831507 ~ 1831766 (+)
G23325 NA non-coding downstream 2035 1833479 ~ 1834803 (+)
G23318 NA non-coding downstream 8401 1839845 ~ 1849069 (+)
G23346 NA non-coding downstream 19837 1851281 ~ 1851678 (+)
G23326 NA non-coding downstream 22861 1854305 ~ 1855168 (+)
G22578 NA other upstream 905230 924803 ~ 925248 (+)
CI01000003_00390997_00406970 WDR33 other upstream 1435264 390622 ~ 408312 (+)
G22420 NA other upstream 1641039 179531 ~ 189439 (+)
G23870 NA other downstream 449216 2280660 ~ 2285641 (+)

Expression


Co-expression Network