G23325


Basic Information

Item Value
gene id G23325
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1833479 ~ 1834803 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU26324
CTCACAGACATGTTCACTCATTTACTTTTAAAAACAGACGGATAATTCAAAATGTTTTCCGTTATTTTGACAAGAAAAAAAAAGAACATATATAAACATAGCACCTAAAATTTTATCTTACAATATCTGTTCTGTACATGGGCCTATGCTGATTCACTTTTTCTCTCTGGGTATTGTCGTGGAAATTCTCAATACAAATCTGACTTCACCACAGACAATTTAAACAACTCCTAGTTGTTAATACAATACTACAGTATCTCGGGGTAATTAGCTGCACAGCATATACCTGAGATGACTTCTTGCTCTTTGCAGAAATTAAGTTTTATTTATGGCCAGATCATTGGTCACAACAACCGAGTGAGTCTCAATGAATAGAAAGATACATGCACATTTAAGCCTTACAGTTGAGTAAAAATCAATGTCTTCTTCACTGTGATTTGTTCTGGTGATTGGTTTGTAATGATCTAAGCTAATCATATGACTGGGTAAGTCTACATTGTCTTTGACCCGAGCATCCTTAGTCTGTATTTTCTGTACATTTCATGTTGAAAATACCCTTTTGATCACTTCTGATGCCATTACATAAAATATTTCAATCACAGTAGCACGAGATAGCATTGCACTGTCTTCGTCGCTACTAGAATTACCTGTGATTTGCCGCTGTGTGTCTCTCACTGAATATGAACTATGACTTGCGCTTCTGAAGTGGTGGCCTACTACTAATTTATGAGCGGCTTTATTTATCAATTCTTCCGATGCCCACTCCGGGTCTGCTAGAGCATATCCTCTTTTTGTCATCTTGCAATCTGCTTTTATTCCTCTGTGGAAACACAGAAGACTAGATGTTCGCTTAGCTAGTACATTGCTATGTCAATCGTTCACTTGTGATGTTCTATACAATTTCTCCGAAAAAATTTTTTTTGATTTTTTTTTAAACTTTCAGGCTTGGTTTCACAGACAGGGCTTAGTCTAAGCCAGGATTAGGCCCTACAAATTGTTTTCAGTTAAAACAGCTCAAACATGCATTTTAGTCTAGAACTAGCCTATAAGCCTTGTCTGTGAAACCAGGGGTCAGAGCCTTATGTTGTGCTGTATTGAACTTTGCACTTTTCTCATTCACATCTGTCTCCTACTCCTATTGTTTCTGGAACTATTTCTGTCTCTATGTATACAGGCTACAATACCAGTCAAAAGCTTGGAATAATTAATGATTTTTTTAAAGTCTTATGCTCATCAAGGCCTCATTTATTTAATCAAAAATACAGTAAAAACAGTAATATTTTAAAATATTACTATTTAAAATTGCTGTTTTCTATTTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26324 True 1325 lncRNA 0.35 1 1833479 1834803

Neighbor

gene id symbol gene type direction distance location
CI01000003_01797491_01803265 PTER coding upstream 29095 1796621 ~ 1806332 (+)
CI01000003_01728663_01761628 MMP16B, MMP16 coding upstream 71000 1728452 ~ 1762479 (+)
CI01000003_01561017_01590804 CABLES1 coding upstream 242556 1560913 ~ 1590923 (+)
CI01000003_01489211_01493471 GATA6 coding upstream 339454 1487837 ~ 1494025 (+)
CI01000003_01430247_01451033 NA coding upstream 381853 1430247 ~ 1451626 (+)
CI01000003_01863421_01867859 NA coding downstream 28051 1862854 ~ 1868137 (+)
CI01000003_01889537_01891879 NA coding downstream 54695 1889498 ~ 1892071 (+)
CI01000003_01893593_01901539 SCHIP1 coding downstream 58790 1893593 ~ 1901769 (+)
CI01000003_01907347_01909263 NA coding downstream 72319 1907122 ~ 1909600 (+)
CI01000003_01921110_01928830 TXNDC12 coding downstream 86034 1920837 ~ 1929621 (+)
G23344 NA non-coding upstream 1713 1831507 ~ 1831766 (+)
G23343 NA non-coding upstream 2035 1830478 ~ 1831444 (+)
G23341 NA non-coding upstream 5637 1827481 ~ 1827842 (+)
G23339 NA non-coding upstream 7683 1825569 ~ 1825796 (+)
G23318 NA non-coding downstream 5042 1839845 ~ 1849069 (+)
G23346 NA non-coding downstream 16478 1851281 ~ 1851678 (+)
G23326 NA non-coding downstream 19502 1854305 ~ 1855168 (+)
G23322 NA non-coding downstream 21074 1855877 ~ 1857501 (+)
G23323 NA non-coding downstream 23685 1858488 ~ 1859214 (+)
G22578 NA other upstream 908231 924803 ~ 925248 (+)
CI01000003_00390997_00406970 WDR33 other upstream 1438265 390622 ~ 408312 (+)
G22420 NA other upstream 1644040 179531 ~ 189439 (+)
G23870 NA other downstream 445857 2280660 ~ 2285641 (+)

Expression


Co-expression Network