G23871


Basic Information

Item Value
gene id G23871
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 2290346 ~ 2291021 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU26953
CACCAAGTTTCCTCAAACTTTATTTAGAAAACAACTTTATTTAAAAACATGCTTGCTGATTAATATTTAGAGGCTTTGTTAACCACAGACCTTATTTCAGGCGATTTAGCAAAAACCCATTCAAAAAACCCATTGACTTCGGGGTGATGGAACCGGAAGTCCTAAAATGCTAACTCGCTTCCGGGTTTTGCCTACAAAAACACGTCATCCCTGAGGTACTCTATTACTTATTGAGATTAGCCTCATTAAGAACTATTAAATAATTACCAATTAACTTGTTCCCCGTCAACGTTTTATTTTTAAATTGCCAGTCAGCGCCAGCATTTTTGATCAAATTCACAAAACTTTCATGGCCCCCAGAATATTTTAGGTAACACTTTATTTCGATGGCCCACTTTAGACATTCTACTTACTATAAGTAACTTTGCAACAACATGCCAACTTATTCTACTAACTCGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26953 True 461 lncRNA 0.36 2 2290346 2291021

Neighbor

gene id symbol gene type direction distance location
CI01000003_02175343_02190917 ST6GALNAC5, ST6GALNAC5A coding upstream 97026 2174790 ~ 2193320 (+)
CI01000003_02101903_02151773 NA coding upstream 138370 2100815 ~ 2151976 (+)
CI01000003_02070747_02072861 NA coding upstream 216957 2070747 ~ 2073389 (+)
CI01000003_01982406_01992219 NA coding upstream 297502 1982336 ~ 1992844 (+)
CI01000003_01969544_01973134 COPE coding upstream 317212 1969330 ~ 1973134 (+)
CI01000003_02422051_02446833 FAM73A, MIGA1 coding downstream 131030 2422051 ~ 2446837 (+)
CI01000003_02466819_02469433 NA coding downstream 175798 2466819 ~ 2469631 (+)
CI01000003_02510102_02514782 NA coding downstream 219081 2510102 ~ 2514969 (+)
CI01000003_02534151_02541110 NA coding downstream 243130 2534151 ~ 2541444 (+)
CI01000003_02551541_02556812 NA coding downstream 260520 2551541 ~ 2556836 (+)
G23789 NA non-coding upstream 82711 2207105 ~ 2207635 (+)
G23787 NA non-coding upstream 89410 2200694 ~ 2200936 (+)
G23771 NA non-coding upstream 150478 2139545 ~ 2139868 (+)
G23770 NA non-coding upstream 150802 2139288 ~ 2139544 (+)
G23356 NA non-coding upstream 242495 2029532 ~ 2047851 (+)
G23893 NA non-coding downstream 162557 2453578 ~ 2454181 (+)
G23898 NA non-coding downstream 163988 2455009 ~ 2456866 (+)
G23913 NA non-coding downstream 169813 2460834 ~ 2461099 (+)
G23921 NA non-coding downstream 188066 2479087 ~ 2479378 (+)
G23925 NA non-coding downstream 199702 2490723 ~ 2491060 (+)
G23870 NA other upstream 4705 2280660 ~ 2285641 (+)
CI01000003_01863421_01867859 NA other upstream 422209 1862854 ~ 1868137 (+)
G22578 NA other upstream 1365098 924803 ~ 925248 (+)
CI01000003_00390997_00406970 WDR33 other upstream 1895132 390622 ~ 408312 (+)
G22420 NA other upstream 2100907 179531 ~ 189439 (+)

Expression


Co-expression Network