CI01000004_00407881_00409797


Basic Information

Item Value
gene id CI01000004_00407881_00409797
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 407881 ~ 410139 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_00407881_00409797.mRNA
GTCTCAAACCAGTAAAAGCACCCAAACAGATTATCAAGCTACGTTTGAACATTGGATCCAACATTGCAGAAGATCTAGCATGTTTTACCAGAACCACAGTCCTGATGTTGTAAGAAGAGGGAATGGCATGGAGTATTACAGCAATGGATTTTGTAGCAGGAGCAATGAAGAGAAGACGATCAAGGTCACCCTGCTTGGCTATAAGGTTATGGAGGAAAAGACAAAGTTCACAGTCTACAAGATCTTAGTGAGGCGAGCACCTGACGAGAGCTGGCACATTTTTAGAAGATACACAGACTTCTCTCGACTGCATGACAAGCTGAGGGAGATATTTCCTGTGTTTAAATTCATCCTACCACCCAAGCGTTGGTTCAAGAACTTCAATTCTGAATTTCTAGAAGAGAGGCAGCTGGGCCTACAAGACTTTCTACAGCACCTAGTTGCACAAAAAGACATGAGAAATAGGTACTTATGACATTATACTTTGTTTAGAAACAGCCTTCAAAACAATTGTCATCATTTACTTACCCTCATTTTGTTCCAAACCTGTATGACATTCTTTCTTCTGCAGAACAGAAGATATTTTGAAAAATGTTTTTTGTCCCTATAATGAAAGTCAGTGGGGTCCAGTGTTGTTGTAGGTCCATTGTTATTTTGGACCCTATAGACTTTCATTGTATGGACAAAAACATTTGAAACATGCTTCAAAATTTCTTCTTTTATGTTCCACAGAAGAAAGAAAATCACAAGTTTGGAACAAAGTTCCACAGTATGTGTAAACCAGACTTGTTGCGTTTGCTCGCACAACTTTTGTGAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_00407881_00409797.mRNA True 817 mRNA 0.39 4 407881 410139

Neighbor

gene id symbol gene type direction distance location
CI01000004_00318181_00339002 CCDC39 coding upstream 67861 317234 ~ 340020 (+)
CI01000004_00311036_00314134 DCUN1D1, DCNL1 coding upstream 93747 309804 ~ 314134 (+)
CI01000004_00291677_00292816 NA coding upstream 115055 291342 ~ 292826 (+)
CI01000004_00266091_00278846 TBL1XR1A, TBL1XR1B, TBL1XR1.L, TBL1XR1 coding upstream 129035 266091 ~ 278846 (+)
CI01000004_00226186_00234811 NA coding upstream 171829 226186 ~ 236052 (+)
CI01000004_00467911_00469949 AGRP2 coding downstream 57663 467802 ~ 471846 (+)
CI01000004_00544278_00547753 NA coding downstream 132794 542933 ~ 547983 (+)
CI01000004_00584081_00605137 RC3H1, RC3H1B coding downstream 173942 584081 ~ 605802 (+)
CI01000004_00617015_00621040 EXTL2 coding downstream 206876 617015 ~ 621258 (+)
CI01000004_00630734_00632040 NA coding downstream 220490 630629 ~ 632205 (+)
G24292 NA non-coding upstream 29770 377110 ~ 378111 (+)
G24347 NA non-coding upstream 51484 356102 ~ 356397 (+)
G24293 NA non-coding upstream 63200 340135 ~ 344681 (+)
G24339 NA non-coding upstream 121803 285867 ~ 286078 (+)
G24279 NA non-coding upstream 283383 117912 ~ 124498 (+)
G24358 NA non-coding downstream 14132 424271 ~ 424487 (+)
G24359 NA non-coding downstream 16570 426709 ~ 426910 (+)
G24426 NA non-coding downstream 98743 508882 ~ 511729 (+)
G24431 NA non-coding downstream 106738 516877 ~ 519291 (+)
G24410 NA non-coding downstream 311376 721515 ~ 722125 (+)
CI01000004_01332533_01345585 SCP2 other downstream 922326 1331583 ~ 1346008 (+)
G25187 NA other downstream 1194403 1604542 ~ 1616470 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 1454020 1867166 ~ 1868986 (+)
G25329 NA other downstream 1672918 2083057 ~ 2085707 (+)

Expression


Co-expression Network