CI01000004_00664431_00666004


Basic Information

Item Value
gene id CI01000004_00664431_00666004
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 664431 ~ 667351 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_00664431_00666004.mRNA
ATGCAAGATCTGGGTCAATCAGTGATAGACTGTCTGAAGAGACGTGATGTGCAGCTTGAAAATAAATTGAAAGCTATGGTTCCACCAACATCTACTCCTGTATCATCCAGATCCAGTGCTGTCATGTCTAAAACTCAAGATCAAACTTATGATGTACCACAACACCTAGTAACCTTCCCAGGAAACTCAAGTTCAGCATATAATCCCCCAGTTAAGTTAGATTTTCCATGCTTTGGAGATGGACAAGACGAAGATCCCATTGTCTTCATCGAACGCTGCGAGGAATATTTTGCTGTATGCCCACTGAGTGACTGTGAGATAGTAGCTGCCCTTACATCAGTGTTAAAGGGAACTGCCAAGGACTGTGAGGACTATGAGGATGTGGCATCACGGAAGCTGCTGGAGAGAAAGCAAGGAGCAAGAGAAGGCGTAAGAGACTTTGCTTTTCACTACCTTGCACTGTGTCTACGGTGGAAACTGGAGATGTCAGAAAAAGATAATGAGCAAAGGAAGAACCTCTCCAATGCCCGTGAGCCCCAAGCAAAACATGTGCCAGCAAACACAAGAGTCGTGCAGCCTGTGTCAAAAGATGAGCCAACTTCATTTAACATAGTCAACATTCCAATCATACTTCATAGCAGATTTTATTCTGCAATGGTGGATACTGGAAGTACGTTGACGCTTATGCGTGAATCACTTTGGAAGCAACTGAGCCAAGGTGAGCCTTGTGAACCAATCGAAGGCCAAGTTTTTATGCTGGCCAATGGCCAAAGACACAAAGCCATAGGAAGAGTGCAGTGGCAATGTGAAATACAAGGTCAAAGTTTGCCATTGACAATATTTATTTTGAGAGACAGAGATTTGACTGTGCCAGTCATCCTTGGTATGGATTTTTTGGTGAAAGCTGGGGTTGTGCTTGATTTCAAAAAAGCACAGTACAGGCTTTCAGCTACTGATAACCAGACCGATCTTGTGTTTTCATTCCTGAGGCAAGACTCTACATCCTCCATCCATTTCTATCTGGCTGTTCCAACTGTATCAGCTTCAGAATCAGTTCTACATTCCATTCAACAGGTGGCGCAGAAAGCAGAAACTACTCAACCATTTAGGAAGGAGTTGGAAAGCCTTTTACTCAACTGGCCCACTGTATGTTCACAAGGCATTGGACATACTAAGGAGATAAAACACCGCATCATAACTAATGATGAGGTACCAGTTAGAAAGAAGGCATACAGACTGTCTATAGACAAACAACAATTTGTAGATGCAGAAATACAAGAACTCTTGCACAAGAACATTATAGGTTCAAGATCAACTGTTTTTTCTGTTTGTCTGTTTCCCTTTCAGGACTGACAGCTGCCATTTTCAGGGCCAGATTCCACAAGGGTGTCTGGTCCCACCTGCATTGAGCCAGGACACAACTTGTCATGCAGAAGATGGATGTGTAGAAACTTCAAGAGGTCATACAAACCTCATTGCATTCATAGATACATGGCCTCCCAGTGTAGAACTGGAACTAAATTATGCAACACTAATTATGGTAGGATAGACACCACCCATCTTTTACACAAACATACAGAACACACACACTACAAACTCACAACATCTCTACCTGGCATAGATCATAAGACTATCTAGGCTAAAATTATTCACATAATGCAAATCTAGCATACATCATTCACCTTCATACATATAGGACAAGGGAAATCATTGCCATCATTTCTTTTCTGTTTTAATTTTGTCAATTTTGAGGTGTTATGGAAACATGCAGGACATGTGCATGGCTTTAGTCACACATCAATTAATAGAATTTCTGATCATTCAAATTCCAAATTCCAAATCTAAATGAGACCTATTCAGTAATGCAACTGGTCTCTTTGGACAAAATGTTTATTATGTCCAGTCCTTGGCATTGTTGCAAACTAGGAGGGCCCCCTAGTTTCCAACATATGACTAATGACAAATGCAAAAAAAAAAAAAGAAAAAAAAAATTTAGAACTGAAATGCAGACATTTCTGTAAATCAGTTACTCAATTCCCAGACCTGTATTCTTGAGTGTTACTTCGCCTGTACATCAAATGCACAGATGATGGTTGTAAAAGCTAAACGAGATTTTAAATTTCTGTTTCTGTAAATTCCATTCTCTAATTGACTTGATTGAAACCTTAGTTTTGCATTAAGGATTTGCAGTTAAAACAACTATTATAGACAGTTTTATAATTGTAATTATGAAATTGTGTGTTTCTATGTTTAAGTATGTGATATATTTAATTATGCATACCACTGGTAAATATACTAGTTATTTTGACTCTTTGCTATTATTCCTTTAACTCAGCCAGACCAAGTCTAAATTCCACTGTCATATCACAGTGATAGTGAAGAGTCTGGTGATTAGAATGAGACCTGCTCACTAAAGGTAGGACTCTGAAAAGGAGACCTTGTTTACCACTCGCACTCTTGACCTGTTCATCATGTGTTATTTTGTGTTATTGTGTTTTTCCAACAACCCTTTTTCTCATCTTATAATAACACCAAATTCATCAGTGTTCAAGTATTGAGCGGTCACTTAGAAGTAATTCAGGTGTCCTGCACGCAATGGAGCATCATCAGCGAAATGAATCGTTCACCCATGGAGATTTGACCTGCCCGGCAAATCAAACCTCCTACTTGAAGGTAACTGAGGACTTCTCACAGGATCAA

Function

NR:

description
k23

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_00664431_00666004.mRNA True 2700 mRNA 0.40 3 664431 667351

Neighbor

gene id symbol gene type direction distance location
CI01000004_00630734_00632040 NA coding upstream 32226 630629 ~ 632205 (+)
CI01000004_00617015_00621040 EXTL2 coding upstream 43173 617015 ~ 621258 (+)
CI01000004_00584081_00605137 RC3H1, RC3H1B coding upstream 58629 584081 ~ 605802 (+)
CI01000004_00544278_00547753 NA coding upstream 116448 542933 ~ 547983 (+)
CI01000004_00467911_00469949 AGRP2 coding upstream 194348 467802 ~ 471846 (+)
CI01000004_00711100_00720189 NA coding downstream 43749 711100 ~ 720716 (+)
CI01000004_01002230_01003932 NA coding downstream 334667 1002018 ~ 1003982 (+)
CI01000004_01069526_01076799 RGS18 coding downstream 402175 1069526 ~ 1077028 (+)
CI01000004_01094661_01097428 NA coding downstream 427310 1094661 ~ 1097658 (+)
CI01000004_01113222_01149263 NA coding downstream 445731 1113082 ~ 1149991 (+)
G24431 NA non-coding upstream 145140 516877 ~ 519291 (+)
G24426 NA non-coding upstream 152702 508882 ~ 511729 (+)
G24359 NA non-coding upstream 237521 426709 ~ 426910 (+)
G24358 NA non-coding upstream 239944 424271 ~ 424487 (+)
G24292 NA non-coding upstream 286320 377110 ~ 378111 (+)
G24410 NA non-coding downstream 54164 721515 ~ 722125 (+)
G24413 NA non-coding downstream 55039 722390 ~ 722637 (+)
G24509 NA non-coding downstream 83687 751038 ~ 753326 (+)
G24418 NA non-coding downstream 88979 756330 ~ 756931 (+)
G24534 NA non-coding downstream 134003 801354 ~ 802056 (+)
CI01000004_01332533_01345585 SCP2 other downstream 665114 1331583 ~ 1346008 (+)
G25187 NA other downstream 937191 1604542 ~ 1616470 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 1196808 1867166 ~ 1868986 (+)
G25329 NA other downstream 1415706 2083057 ~ 2085707 (+)
G25882 NA other downstream 1880724 2548075 ~ 2573049 (+)

Expression


Co-expression Network