CI01000004_00711100_00720189


Basic Information

Item Value
gene id CI01000004_00711100_00720189
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 711100 ~ 720716 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_00711100_00720189.mRNA
GATATTTGTGAGATCTCCTGCGTTTATCATCTCTGTGAGAGTCTTGGGCAATCATGGCGGCGATGACACCAGCGCGGAGTTCTCTGAGAATACTGAGACGGCTGTGGCCTCTGGACAGGTGCTGCAGTTCAAACTCTCAGATATTGGAGAGGGCATAATGGAAGTGACAGTAAAAGAGTGGTATGTCAAGGAAGGGGACAGGGTCTCCCAGTTTGACAGCATTTGTGAGGTCCAGAGTGACAAAGCGTCCGTCACTATCACGAGCCGCTATGATGGCGTCATCCGTAAGCTGTACTATGACGTAGATGCTATCGCACATGTTGGTTCACCTCTTGTGGACATCGAAACGGACAAAGCACTGGAGGGCGCCCCAGAGGAAGATGTGGTAGAGACTCCAGCAATATCCCATAAGCAACCACATCGAGAAATCAAGGACCAAAAAACCCAGGCGACACCAGCAGTACGGCGTCTGGCTATGGAGAACAATATTAAACTAAGTGAGGTGGTCGGGACAGGAAAAGATGGCCGTATTTTAAAAGAGGACATTATTAGTTTCTTAGCCAAGCAGACAGGAGCCATCCTCCCTTATGAGGTTGAGAAAACCCCAACACCCGTGATTTCCACTTCAAATACCCCACCCAAAGAGAAGACGCCCATCATGGCACCTCCGACGATCCCACTACCCATCTTCTCTGGCAAAGACAGGACAGAGCCTCTGAATGGTTTCCAGAAGGCCATGGTGAAGACCATGACTGCTGCTCTGAAAATTCCTCACTTCGGTTACTGTGACCAGGTCGACCTGACGCAGCTAGTGCGGTTACGTTCGGAACTGAAGGACCTGGCGAAATCTCGGGGTGTCAAACTCAGCTACATGCCTTTCTTCATCAAGGCATCTCATAACATCGGCCTGGCGATGGACACTCCTCAGGGCCTCCTGGTGCCCAATGTGAAGAGCGTTCAGGCCCTCAGTGTTTTTGACATAGCTGTGGAGCTCAACCGTCTGCAGGCTCTGGGTTCAGCTGGACAGCTAGGCACCGCTGATCTCACTGGAGGAACTTTCACCCTCTCCAACATTGGCTCGATTGGAGGGACGTATGCCAAGCCAGTGATTCTGCCCCCGGAGGTGGCCATCGGAGCTTTGGGAAAGATCCAGGTTCTGCCTAGGTTTAACTCCCGTGATGAGATAGTAAAGGCGTACATCATGAATGTCAGCTGGTCCGCCGATCATCGCGTCATAGACGGGGCCACTATGTCCCGCTTCTCCAACCTGTGGCGGTCTTACCTGGAGAACCCAGCTTCCATGGTCCTGGATCTCAAATGAACACTGCTCTGGAAATGAGATCTCTGTTGTCCATTACTTCCTGGAGTGTCTTTAGGTTACTTACAGCTTCAAAACAGTGTGCCGTGACTCACATGAACACTCAAGTTTCTGCTTTCACATTCATTTGTGGGGAAAAGAAAAAAAAGACTTCAGTTCCTTTTCTCTATTTGCCTTATTTCAGATTAAAGACTGTTACTGCAACTTTACATCACAGAACACTTGCCTCATGTTAATGAGTTTTTGAGGACCGGGACACCTGAAATCACCTCTAAGTTTTCCTAATGCACAAAGCTTGTGTGTGGGAGACAGAGGCTGATACTGGCTGGCTCTTGGACAAGCATCGGGACTGTAACATCTCATTGTTTGCTGACTTTCTCTGAGACTTCATTCACACAAGCCTCTGTAGAGTGGACAGACAGCCACTTCATCTAAAACCACTTGTGTGTCAGTGTGAAGAAAGGACCATCATTTAACTGTTAAAAGAACAAATGGACCACACATGGACAGATTACTAAAATGTGATAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_00711100_00720189.mRNA True 1848 mRNA 0.49 9 711100 720716

Neighbor

gene id symbol gene type direction distance location
CI01000004_00664431_00666004 NA coding upstream 43749 664431 ~ 667351 (+)
CI01000004_00630734_00632040 NA coding upstream 78895 630629 ~ 632205 (+)
CI01000004_00617015_00621040 EXTL2 coding upstream 89842 617015 ~ 621258 (+)
CI01000004_00584081_00605137 RC3H1, RC3H1B coding upstream 105298 584081 ~ 605802 (+)
CI01000004_00544278_00547753 NA coding upstream 163117 542933 ~ 547983 (+)
CI01000004_01002230_01003932 NA coding downstream 281302 1002018 ~ 1003982 (+)
CI01000004_01069526_01076799 RGS18 coding downstream 348810 1069526 ~ 1077028 (+)
CI01000004_01094661_01097428 NA coding downstream 373945 1094661 ~ 1097658 (+)
CI01000004_01113222_01149263 NA coding downstream 392366 1113082 ~ 1149991 (+)
CI01000004_01167271_01194834 NA coding downstream 445223 1165939 ~ 1195104 (+)
G24431 NA non-coding upstream 191809 516877 ~ 519291 (+)
G24426 NA non-coding upstream 199371 508882 ~ 511729 (+)
G24359 NA non-coding upstream 284190 426709 ~ 426910 (+)
G24358 NA non-coding upstream 286613 424271 ~ 424487 (+)
G24292 NA non-coding upstream 332989 377110 ~ 378111 (+)
G24410 NA non-coding downstream 799 721515 ~ 722125 (+)
G24413 NA non-coding downstream 1674 722390 ~ 722637 (+)
G24509 NA non-coding downstream 30322 751038 ~ 753326 (+)
G24418 NA non-coding downstream 35614 756330 ~ 756931 (+)
G24534 NA non-coding downstream 80638 801354 ~ 802056 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 239254 467802 ~ 471846 (+)
CI01000004_01332533_01345585 SCP2 other downstream 611749 1331583 ~ 1346008 (+)
G25187 NA other downstream 883826 1604542 ~ 1616470 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 1143443 1867166 ~ 1868986 (+)
G25329 NA other downstream 1362341 2083057 ~ 2085707 (+)
G25882 NA other downstream 1827359 2548075 ~ 2573049 (+)

Expression


Co-expression Network