CI01000004_01002230_01003932


Basic Information

Item Value
gene id CI01000004_01002230_01003932
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1002018 ~ 1003982 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01002230_01003932.mRNA
CTATAAATAGACGTGTGACAGTTGCGCTCATCAGGTTCCTTTGTCTTCAGAACCGCATTGTGTACCGTGTGTGTGCATCTCTACCTCTTGCCTCTCTGAACTATCCCTTTGTTAGGAGTTAGTTTTGCAAGCAGGATTAAGATTTTTCTCACTCTTTTCCTCTTTCTCTGTAAAACAAAAAGAAAAGATTTAAAGAAAAGCATTACATAATCATGTCAAGAGAGTCTAAAAAATTTGTGCCGCCCTGTTCACGGCCCATTTCGGATGATGATCCGCATGATTTTTGCATTGAATGTCTGAGGGAAAAGCACACTTTAGCAGACCTCGAGGACGCAGAGTATCTACATGATGAATTATCAAAACATTGGAACAAGCCATATTCCCCTCGTGTCTTCATGCCCTCAACGTCGGTATATTCGACTATTGTTGGTGCGAAGGCACAAGGCTATATAATGATGCCCCAGATTGAAGAGACGCTCACAGGCTATCTCTCCCCTGGCAGCGCATCATCCATGAAAAATCCCTGTTCTTCCCTCCAGACCATGCAGACTTCTTTAAAAAGGGTGCCTTTTATAGATTGACATTTTATTTTCTAAAAACAGAATTACAGCTTGATTGGAAATAATTCCCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107667797

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01002230_01003932.mRNA True 631 mRNA 0.41 2 1002018 1003982

Neighbor

gene id symbol gene type direction distance location
CI01000004_00711100_00720189 NA coding upstream 281302 711100 ~ 720716 (+)
CI01000004_00664431_00666004 NA coding upstream 334667 664431 ~ 667351 (+)
CI01000004_00630734_00632040 NA coding upstream 369813 630629 ~ 632205 (+)
CI01000004_00617015_00621040 EXTL2 coding upstream 380760 617015 ~ 621258 (+)
CI01000004_00584081_00605137 RC3H1, RC3H1B coding upstream 396216 584081 ~ 605802 (+)
CI01000004_01069526_01076799 RGS18 coding downstream 65544 1069526 ~ 1077028 (+)
CI01000004_01094661_01097428 NA coding downstream 90679 1094661 ~ 1097658 (+)
CI01000004_01113222_01149263 NA coding downstream 109100 1113082 ~ 1149991 (+)
CI01000004_01167271_01194834 NA coding downstream 161957 1165939 ~ 1195104 (+)
CI01000004_01210703_01220270 PPM1L, PPM1LA, PPM1L.L coding downstream 206472 1210454 ~ 1220283 (+)
G24604 NA non-coding upstream 27970 973819 ~ 974048 (+)
G24585 NA non-coding upstream 69982 931633 ~ 932036 (+)
G24583 NA non-coding upstream 71380 930304 ~ 930638 (+)
G24580 NA non-coding upstream 73197 923387 ~ 928821 (+)
G24562 NA non-coding upstream 115901 885904 ~ 886117 (+)
G24621 NA non-coding downstream 17639 1021621 ~ 1022010 (+)
G24631 NA non-coding downstream 37316 1041298 ~ 1041503 (+)
G24638 NA non-coding downstream 51113 1055095 ~ 1055333 (+)
G24640 NA non-coding downstream 52562 1056544 ~ 1057124 (+)
G24641 NA non-coding downstream 59715 1063697 ~ 1064152 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 530172 467802 ~ 471846 (+)
CI01000004_01332533_01345585 SCP2 other downstream 328483 1331583 ~ 1346008 (+)
G25187 NA other downstream 600560 1604542 ~ 1616470 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 860177 1867166 ~ 1868986 (+)
G25329 NA other downstream 1079075 2083057 ~ 2085707 (+)
G25882 NA other downstream 1544093 2548075 ~ 2573049 (+)

Expression


Co-expression Network