CI01000004_01113222_01149263


Basic Information

Item Value
gene id CI01000004_01113222_01149263
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1113082 ~ 1149991 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01113222_01149263.mRNA
GCATAAAAAGGGTTGTGAGAACAGCCCGCTCTTATTAACTGAAATAACTGAAGCACAACGGCACACCAACACCTATCAGCACCAGAAAAGTTTTTGTTAAGATGCCAACCATATTGTCATCTTCAACTGAAATAAAGAACATGAACGAGGAGGATAAAACAGTCAGTCCCCGGAGACTAGACAAGTGGCGGTTTCGTTGTCTGTTGACAGACAAACTGAACCCCAGTGAGACCTTACTGTGGTCCCAGTCATTGGAAAACCTCCTTAGATCCAAATATGGCATGGCAACATTCCACACCTTCCTCAAGTCTGAGTTCAGTGATGAGAACATTGAATTTTGGCTGGTTTGTGAAGACTTCAAAAAAATCAGGAGTTCATCCAGGCTATCCTCAAGGGCCAAGAAGATATTTGAGCGTTACATCAAGGCAGAAGCTCCCAAAGAGATAAACATTGACCACGTCACAAGAGAGCTTATCAAGCAGAACGTCCAAGCTCCAACAAGAGTGTGTTTCGATGAGGCTCAGAGGATTGTCTTTGGTCTTATGGAGAGGGATTCCTATCCCAGGTTTCTTCGCTCGGACATGTACATGTCCCTTCTGGAATCAGTCTCACAAAGGATTAAGAGCTTTCCTATTAGAGGAACGCATGAAGACATTTCACAGCTGCCTCTCCCTTTTTCAACGAGGGAGATCAGTCTCTTTCAGAATGTGTCTTCGGCTACTGGGTCTGATGGCCTCAACAGTGTCAGTGGTTCCTCTCTTCGCATCGTGCGAAAACGCGCAACGTCCCCTGTTCTTCTCTCTGGCTGGCGTCGATGCACCATTGGTCTGATCGAGCCGACACAACGGAGGGTTCAGAAATGCAGACATGTAATGATTCTGATCGCGCCATACTGGCTGGGGAGACTGTGGGGTTGTGGAGATTGCGCAACTGCATTACGACCAGCCTCAACACGTTCTTTATATAATCTCAAATGGAGGGTGTTTGAGAGATGGTGCGGAGATAGGAACATCGTTCCTTTCTTGTGTTCAGTTTTGGATGTACTGTGTTTGGTCTTGACGCGGAAACATAGCGTACTCGTGAAATTAAATTTCTATAAGAAGGTACCCTTGGCCTTTGCCTCGGCCATGTACATGCTTACTTCTGCACAAGGAAGAGCATGTCGAAGAGGAAGAGCAGTAATTCAGGACTCACTCCTGATAAGAGAAGCCGGTTATCTCAACCCAACCCCGAAGAGGAAGAGGAATCGGGCTTCTTCAGTTCAGGAGATGGCAAAAACTCATCAAAGAGTCATAAGTCAGGCGAACTCAGCTGACACACAGGCTCGTGTGGAGAAGATGAATCACATTCAGGCTGAGCTGGAAGATCTGAGTTTCCAGGACTCCACTCTGGCTCAGCAGATCGATCAGTTTAAACAGGCCTGTGCCGCTGCTAAAGAAAGGCTGAGTAGAATGAGCCGTGAAAAGCAGGACCTGCTGCATGCGATGGAGTCTAAGCAACGAAAACTGGCTGCTATGGAAGAGAAACGAAAGAGTCGTTTTGGTGAGCAGATGCCGGCACTGCTGAGGGCTATAGATGAGGCTGACCGGCAGGGTCAATTCAAGAGGAAACCTGTTGGGCCACTCGGATTCTGCATCCGACTGCGGGATTCGGAGCTGGGTCTTGCAGTGGAGAGCTGTCTGAAGTCTCTGATGTTAGCTTTCTGTTGCGATAACCACGCTGATGAGAGAGAGTTACAGAGAATCATGAGTCACTGCTTCCAGCGTGGCAGAAGACCTCAGATCATCGTCAGCACATTTACCAACACACTCTACAATGTCAGCAACAGGGCTGTCAATCACCCTCAATACCCAACAGTGCTCCAGGCCCTTGACATTGAGAATCCAGTTGTGGCCAAGTGTCTGATAGACATGAGAGGAATTGAAACCATTCTGCTCATCAAGAACTCTGCAGAAGCGAGAAGGGTCATGCAGGGTGGACACCCACCACGCAATTGCAGGGAGGCCTTCACATGTGAGGGGGACCAGGTCTACAATAACCGTTACTACTCTTCAGACCAGAACCGAGTGCAGTACCTCACTAAAGATGTTGAAGAGGAAATCAGACAACTGCAGTCTGCCTTACATTCCCAGAGAACGCAATTGGATCGCTTTCAGCAGGACGTGCAGCAGATTAATGAGGACTTAAAACAGAACCAAATTCTTCTTTGCAGAGCCTATGAAGACCAAAAGAAGGCCCAGGAGCGTTGTCAGAAGCTTCAGGCAGAGCTGACGGAATTGCAGAATGTTGAGGAACCACAGTCAGAGGACTTGAAACCTTTGGGGGAGGAACTGGAGGAGCTCAGCAGTCGGATAAGTGTATGTCAAGTGGAATTTGAAGCTGCGCTGAAGCAGACGCAGACACACAAGGAGGAATGTGAGGAGGCCGAGCAGCTTTGCCTGCAGCAGAGGGAAGCTTTTAACAGCATCGCAGAGGAAGCTGAGCCCATTAAGGTCTGAGAAGTTTTATTCACGAGTGTGTGTAACATCATTACTTCCTCCTGACCAACCGCTTCTGGATGACTTTTAACCACTAGATTCCTCTCAGCTAATGTTTAAATATGGCAGCTTCAGGCCATATGCCCTTTTTCAAAGTTTTGATTTTGTTTTTGGGGTCTACTAGAATGTTTTCATGCTTGAATGAAAAAAAAAAAAACATTATTTTTCACATATTTAAAATTATTGTAGCACCCTTTTCACAGTCTGTCAGTAACGCTCTATTTAGTTCCTGTTTTTATGAAGCCCCTCCTTCTGATATGTGCAATGTGCTCTGATTGGTCGGCTGGACGAGTGTGTTGTGATTGGTCAACCACTTTGAGCGTGTTTCCGAAATGTCACACCCCTTTACCATAACCACAGCACACTACTAACGCAACTCAACCAGGCTTTGCCCCATTTTTTTGCTTATGTCTTGGAAGAGAATTATTTAAATAAGGAATATTGTGACATCTACATTCCCAGAAGAAAACTCAAGACTACAATCGAGGCGTTTCAGGGAGCTCAGAAACAGTGTTTACCTGTATTTTGTCCTATTTAAGTTTGGAAGTTTCATTGAGCTGTGTTGAGTCTTGAGCCTACCCAGTATGGATTACCCGAGTTCTAGAACAGTGATGTTTCTCTGTTGCCATTATATTTTGTTTTGTAAAGCTATGACTGACCTTTTGTTTGTATTTGAAAACTGAGATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01113222_01149263.mRNA True 3226 mRNA 0.46 17 1113082 1149991

Neighbor

gene id symbol gene type direction distance location
CI01000004_01094661_01097428 NA coding upstream 15424 1094661 ~ 1097658 (+)
CI01000004_01069526_01076799 RGS18 coding upstream 36054 1069526 ~ 1077028 (+)
CI01000004_01002230_01003932 NA coding upstream 109100 1002018 ~ 1003982 (+)
CI01000004_00711100_00720189 NA coding upstream 392366 711100 ~ 720716 (+)
CI01000004_00664431_00666004 NA coding upstream 445731 664431 ~ 667351 (+)
CI01000004_01167271_01194834 NA coding downstream 15948 1165939 ~ 1195104 (+)
CI01000004_01210703_01220270 PPM1L, PPM1LA, PPM1L.L coding downstream 60463 1210454 ~ 1220283 (+)
CI01000004_01228506_01230204 ARL14 coding downstream 78414 1228405 ~ 1230414 (+)
CI01000004_01237895_01247463 NA coding downstream 86377 1235162 ~ 1247463 (+)
CI01000004_01263941_01279547 NA coding downstream 113950 1263941 ~ 1279758 (+)
G25044 NA non-coding upstream 6158 1106696 ~ 1106924 (+)
G24526 NA non-coding upstream 31548 1080811 ~ 1081534 (+)
G24641 NA non-coding upstream 48930 1063697 ~ 1064152 (+)
G24640 NA non-coding upstream 55958 1056544 ~ 1057124 (+)
G24638 NA non-coding upstream 57749 1055095 ~ 1055333 (+)
G25129 NA non-coding downstream 140231 1290222 ~ 1290678 (+)
G25143 NA non-coding downstream 161052 1311043 ~ 1311591 (+)
G25222 NA non-coding downstream 295074 1445065 ~ 1445396 (+)
CI01000004_01446583_01461259 NA non-coding downstream 309342 1446203 ~ 1465922 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 641236 467802 ~ 471846 (+)
CI01000004_01332533_01345585 SCP2 other downstream 182474 1331583 ~ 1346008 (+)
G25187 NA other downstream 454551 1604542 ~ 1616470 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 714168 1867166 ~ 1868986 (+)
G25329 NA other downstream 933066 2083057 ~ 2085707 (+)
G25882 NA other downstream 1398084 2548075 ~ 2573049 (+)

Expression


Co-expression Network