CI01000004_01446583_01461259


Basic Information

Item Value
gene id CI01000004_01446583_01461259
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1446203 ~ 1465922 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01446583_01461259.mRNA
CTATATAATAAAGATTGAATGAACTGTAATATGTCACTTAGCATCAGTCAAATGAACAAATATAGTGAAATTTATGTTGCCAAAAATCTAGACCAACCACTCATTTTAATAGTTGCAAGTTACTCTTTAATAAATAAATATATTTAAAAAAATCAAATAAAAGAAAACAATATTTGTTTTTATATATAAAATATATAACTTAAATTAAACAAATAAATACATTTGGGGTAAAGGGTTTTAAATTATGATACAAATCCCTGCAATATTAATAATACCATGACTGTTATATTGTTTTGACTCCTCCATGCCTCATTTTCTAGTAAATGGTGTTTGATAGCACACTACCCTTCAGTGCAGTTATTCATACTCGCTTACGTTTGATGTCGTCATTGATTCAAATTGCCAGTGAATCTATTGGAGATTCAGTGAAGGAGCGACGCCATCCGGACACGCTTTTGTTTGTGGATGAACACCTCCAACCCGTTTCGGAAATGTGGACAGAAATTGGGAAATTATTATTTTTTCATTTTTTACTTTCGGAATTCTACTCAGCAAAAGGTACCGAAACTGGCACTGAGACGGAGTGCGAGGATGGACAGTTTCAGTGTAACAATAAGAGATGCATTCCCACCATATGGAGATGCGATGATGATGATGACTGCTCTGACAACAGCGATGAGGAGAACTGCCCTCTAATACCAGATGGCAGCGTGCCCCCTGCCAAGCACCGCCCGACCCCCACGAGGCTTGTGCTCGGTGATCAAAGCTCCACTGAGCTCTGCCCCGAGGAGACGGAGTCCAAATGCATCATTGTTGAGGAAAACTGGGCTGAAACATGCCCAGAGAAGGAAGGGCGTTAAAAGCTGAATTTCCTCTTAACGTCACGCTCAGACTCAACAGGGGAGCTGTGGTAGAAGAAACGGCGTTCTTCATCATTTATCACAAACATATTGAGAGGCCTGAGGATGAAAGAAAGGTGAACGCAGATTAACAATTACCACCAATTTGTCAACAGTGAAGTATTACACTGTCTGAAAAACAAATCTAGCATTGATTGAGAGACAAATTTGCTATTAAGAATAGGGAGGGAACTTGGGCAATTATGAAGGAGGTGCTCTGTTTTCTGAGGAGAGGCTGAAGGCTTGTTTGATGTTTGCATGCTGCTGTTTAAATGATGTCTGTAGGAAACAGCCCACACAGTTGTGTGCACTTTACTAATCAAATGTGTACACACGGCACATCCACACACGCAGACTCTTTATTCTGAGGTAAAACTAGCATGAGCGCTCTTATATGTTTGATCAAAAGCTTGTAGGCTGGAGGTCTCCAACCTTATTGTGAGTGAGAGCTACCTGAAGAGAGCTACTGTATCCATGCTGTTTCTTTACCTTATGCTTCAGGCTGCTAATATTTTTAGTTTCATATAATATTTTTAAGGAATAATAATGAAATATCTTTTTTATTATTGAAATATTAAAACTATTGTGAATGATATCTATCAAGCATTATATTATTTA

Function

NR:

description
PREDICTED: low-density lipoprotein receptor-related protein 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01446583_01461259.mRNA False 1517 mRNA 0.38 3 1446203 1461916

Neighbor

gene id symbol gene type direction distance location
CI01000004_01426795_01429440 EBNA1BP2 coding upstream 16763 1426795 ~ 1429440 (+)
CI01000004_01377802_01389208 NA coding upstream 56788 1377685 ~ 1389415 (+)
CI01000004_01332533_01345585 SCP2 coding upstream 100195 1331583 ~ 1346008 (+)
CI01000004_01321057_01329157 UCK2A, UCK2B, UCK2 coding upstream 117046 1321057 ~ 1329157 (+)
CI01000004_01305065_01310559 ZTE38 coding upstream 135644 1305065 ~ 1310559 (+)
CI01000004_01501609_01545725 NA coding downstream 39693 1501609 ~ 1546119 (+)
CI01000004_01578642_01584658 NA coding downstream 116650 1578566 ~ 1584808 (+)
CI01000004_01592461_01602968 NA coding downstream 130440 1592356 ~ 1602968 (+)
CI01000004_01623427_01625278 LEPROT coding downstream 161511 1623427 ~ 1625340 (+)
CI01000004_01670419_01699238 PDE4BB, PDE4B coding downstream 208503 1670419 ~ 1699238 (+)
G25222 NA non-coding upstream 807 1445065 ~ 1445396 (+)
G25143 NA non-coding upstream 134612 1311043 ~ 1311591 (+)
G25129 NA non-coding upstream 155525 1290222 ~ 1290678 (+)
CI01000004_01237895_01247463 NA non-coding upstream 209809 1235162 ~ 1247463 (+)
G25076 NA non-coding upstream 285773 1140627 ~ 1160430 (+)
G25226 NA non-coding downstream 108703 1570619 ~ 1570878 (+)
G25192 NA non-coding downstream 123350 1585266 ~ 1585620 (+)
G25242 NA non-coding downstream 242341 1704257 ~ 1704558 (+)
CI01000004_01757017_01757201 NA non-coding downstream 295074 1756990 ~ 1757864 (+)
G25248 NA non-coding downstream 298614 1760530 ~ 1762263 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 974357 467802 ~ 471846 (+)
G25187 NA other downstream 142626 1604542 ~ 1616470 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 402243 1867166 ~ 1868986 (+)
G25329 NA other downstream 621141 2083057 ~ 2085707 (+)
G25882 NA other downstream 1086159 2548075 ~ 2573049 (+)
G25992 NA other downstream 1274620 2736536 ~ 2736768 (+)

Expression


Co-expression Network