CI01000004_01501609_01545725


Basic Information

Item Value
gene id CI01000004_01501609_01545725
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1501609 ~ 1546119 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01501609_01545725.mRNA
CAGTCAAACAGACATGTCCACCAGAGAAGTTTGACTGTGGAGGGAAGTGTGTGTCGCTGTCCTGGCGGTGTGACGGAGAAAGAGACTGCGAAAATGGTGAAGATGAAGCAGATTGTGCAGCAGACGCAAAGTCCTGCTCAGCGGGGGAGTTCCAGTGTCGTAACCGTAAATGTTTAGCACCGGTCTATGTGTGTGACGGCGATGATGACTGTGGAGATGGCAGCGATGAGGAGAAGTGCTCTCCGCCCACCTGTGGGCCGCACGAGTTTCGCTGTAACAGCTCAGAGTGTGTGCCGCAGCCCTGGACCTGTGACGGAGACCCTGACTGCTCTGACGGTTCTGATGAGTGGGCGGTGCGATGCGGGGGCGGGTCTGGTCGACCAGTTCCACCCCCCACCCGGAGACTGCAGTGCGGTGCTGGAGAATTTCGTTGCGGCAGTGGGGAGTGTGTGAGACTGACCTGGAGGTGCGACAGGGACCCTGACTGCAAGGACAAGTCAGATGAGGCGGACTGCCGTAACATCCAGGTCAATCACGATGTCACTTTGCCCAGGCCGGAGGGAAAATGGGCAAGCAGAGTGGCACCTCTGCTCACATGCCGACCTGATGAGTTCCAGTGCGGAGACGGATCCTGCATCCACGGCATCAAACAGTGCAACAAAATACACGACTGCCTCGACAAAAGCGACGAGGCTGGCTGTGTAAATGCCACAAAGTGTGAAGGACCTCTGAAGTTCCTCTGCAAGAATGGAGAATGCATTGACGGCAGCAAGGTGTGTGACAACGTGAAGGACTGCAAGGATCGGTCAGATGAACCCAAGAAGGAGTGCAAAGCCTTTGCTGCTCATTTGACATATGTTTGGCTCCGAGCAACGTGGCCTTGCCCTAAATTGTTCACTTCCATGTATATTGTCAGGATGCCAGCACCTACTAATGAACACAGAGAGCTAGAGAGAACACCTGGTCCACAAATGCTACCCTGTCTTAATGAATGTTTGCTTAACAATGGAGGCTGCTCACACATCTGTATGGATCGTCCCATTGGATACGAGTGCCAGTGTCCCGCTGGCTATAAGCTCCTGGACAAGCGGACATGTGGAGATATTGATGAGTGTGAGAACCCTGATGCCTGCAGTCAGATCTGCATCAACCTAAAAGGGGATTTCAAGTGTGAATGTCATCCGGGTTATGATATGGACCCCGTAAGCAAGACCTGTAAAGCTGAGGGAAAAAGCCCTTACCTGATGTTCACGAACAGGCACGAGATCAGGCGTATTGACCTGGTGAAGAGGGACTACACGCAGGTGGTTCCTACTCAGAAGAATGCAGTGGCCATTGATATAGACGTCGCCGCCAACCGCATGTTCTGGTGTGATCGTTTTCAACACAAAATATACAGTGCTTATATCCACGAGGCGAGCGACCCGTCTCGACACATTACTCTGATCGACTCAGATCTGCATTCCCCTGAGGGGCTGGCACTGGACTGGGTTCAGCACAACCTCTACTGGACCGATTCGGGTGACAGAACCATCTCTGTGGCTTCAGCGGATGGCAGAAGGAGACGTGTGCTGATCAACACCGATCTGAGCGAACCACGGGCCATCGCTGTGGATCCAGAGAGAGGGTTCATGTATTGGTCTGACTGGGGCATCAGGGCCAAGATTGAGAAGGCTGGCATGAATGGTGTAGATCGGCAAGTGTTGGTGTCTGAGGACATTGAGTGGCCCAATGGAATCACACTTGATGTGGTTGGTAAGCGCTTGTACTGGGTGGACTCAAAACTACACCTGATCTCCAGTGTGGATTTAAACGGGGCCCATCGCAGAGTCATCCTGTTCTCCAGCGAGAGACTCGGCCACCCTTATGCCCTCGCTGTGTTCGAGGATCGGGTGTACTGGACGGACCGTGAGAAGGAGGCCGTTTACAGCGCAAACAGACTCACAGGGCAGGATGTGACCAGCCTTGCCGAGCACCTCAACGACCCTCATGATATTGTGGTTTTCCATGAGTTGAGCCAACCTGGGGCTCCTGACAGCTGTAACCTGGGCGGCGTGACTAACGGTGGCTGTGACTTCCTTTGTCTGCGAGCTCCTCAGATCAGCGAACACTCACCCAAATACACCTGCGCTTGCCCTGATGGCGAGGAGCTCAGCCCTGACACACGCCAGTGTGTACCCGTCCAAAACGACACTGCCGTAACCTCTACTGTCCCTATCAACATCACCGTGGAGACAGGGGCTGGCCGGGCACAACAGTCCCCTGCAGCAGTGACTTCACAGTCCGACAGTGTGGTTGAAACCACTTTCTCATCGCTCCTCACTTCCAGCCCAGAGGAATCGGCTGTCTCCTCTAATGCTACAGCAGAACACAGTCCTACACAGACATCCATAACCACACCAGGAGACCTGAGCAACCTGTCTCATCACTCTGGCAATGAGTTGTTTCTCCTTGGCCGTAATCTGACAGTGGCAGTGCTTGGTGTCGTAATTCCCATAGTGGTCTTCGGGGTGCTGTGTGCCGGCGTTTATCTTGTTTACCGCAACTGGAGGAGGAACAGCACCAAAAGCATGAACTTCGACAACCCAGTCTACCGCAAAACCACAGGAGAGACGGAAGAGGACGAGATACATATTGGTCGGACTGACGGGCTCGCTGGTCATCACCACCCTTACCCTGGACCCGTGGTCGGCATGACGCCAGTCGGCACAGGGACGTGCCCGCCGTTCATCGCTCTGCCTTTGGGGACCGGTTTACCAGACCCTTCCACACACTGGTACACAGAGCAACCCACCATCTCTAGTACTAAGTGAAAAGGAGATGACTTTAGAAATACTGTGACTGCAGGGAGCAGGACTGATATGTGGCTGCCAAGCTATGCAGGAATAGCATTTTATCAAGCTGAATCATTCTTAAAATGGCCAGGTTTTAAAGTTAGCTGCAGCATGCTGGAGTGCAAACATTGGATGATTACTAAACGAAAAGGTTTATCATTTCAGACCCATATTCATCTGGTCCATTTTATCATCATTTTATTGCTAGTTGGAACTATCAGGCCAAGCCTTTTCAAACCTGCATTATTAATATTTATCTTAAAATCATAGAGAAATCTAGAACAGTAACTTGCTTTAAATTTACTACTGAAATATTGGAACTAGTCTATTAGACTATTAATGTCCAGCACTTTAGCTAAAGCTGTAGAGAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01501609_01545725.mRNA True 3207 mRNA 0.52 17 1501609 1546119

Neighbor

gene id symbol gene type direction distance location
CI01000004_01446583_01461259 NA coding upstream 39693 1446203 ~ 1465922 (+)
CI01000004_01426795_01429440 EBNA1BP2 coding upstream 72169 1426795 ~ 1429440 (+)
CI01000004_01377802_01389208 NA coding upstream 112194 1377685 ~ 1389415 (+)
CI01000004_01332533_01345585 SCP2 coding upstream 155601 1331583 ~ 1346008 (+)
CI01000004_01321057_01329157 UCK2A, UCK2B, UCK2 coding upstream 172452 1321057 ~ 1329157 (+)
CI01000004_01578642_01584658 NA coding downstream 32447 1578566 ~ 1584808 (+)
CI01000004_01592461_01602968 NA coding downstream 46237 1592356 ~ 1602968 (+)
CI01000004_01623427_01625278 LEPROT coding downstream 77308 1623427 ~ 1625340 (+)
CI01000004_01670419_01699238 PDE4BB, PDE4B coding downstream 124300 1670419 ~ 1699238 (+)
CI01000004_01715623_01744133 SGIP1B, SGIP1 coding downstream 169504 1715623 ~ 1744133 (+)
G25222 NA non-coding upstream 56213 1445065 ~ 1445396 (+)
G25143 NA non-coding upstream 190018 1311043 ~ 1311591 (+)
G25129 NA non-coding upstream 210931 1290222 ~ 1290678 (+)
CI01000004_01237895_01247463 NA non-coding upstream 265215 1235162 ~ 1247463 (+)
G25226 NA non-coding downstream 24500 1570619 ~ 1570878 (+)
G25192 NA non-coding downstream 39147 1585266 ~ 1585620 (+)
G25242 NA non-coding downstream 158138 1704257 ~ 1704558 (+)
CI01000004_01757017_01757201 NA non-coding downstream 210871 1756990 ~ 1757864 (+)
G25248 NA non-coding downstream 214411 1760530 ~ 1762263 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 1029763 467802 ~ 471846 (+)
G25187 NA other downstream 58423 1604542 ~ 1616470 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 318040 1867166 ~ 1868986 (+)
G25329 NA other downstream 536938 2083057 ~ 2085707 (+)
G25882 NA other downstream 1001956 2548075 ~ 2573049 (+)
G25992 NA other downstream 1190417 2736536 ~ 2736768 (+)

Expression


Co-expression Network