CI01000004_01578642_01584658


Basic Information

Item Value
gene id CI01000004_01578642_01584658
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1578566 ~ 1584808 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01578642_01584658.mRNA
GTATAAAAGAAGTTCAAAACTGTGGGCGTCTTACTCTAGTGAGGACCATAGCAGTCTTAGCGTCAAAGAAACAACCATGTTGCTGCTTTTACTGTCGCTCCTTCTGGTGTCGTCTCAGTCTTATTCCTTCCCTACAGAACCCACCTTGCCTGAACATCAGACAGAAACTCGGTTACACTTTGCAGCTTTGGACGAAGTTAGGCTTTTGGCAAACGGCCTCCTACAGCTGGGCCATAGCCTGAGGGACTTTGTACAGAATACCAAGAACCAGATCAATAATATTTTCCAAAAGCTCAATATCTTTGACAAATCCTTCTACCAACTTTCTGTGCTGACCAGCGAAATCAAGGAGGAGGAGGAAGAACTGAAGAAGACCACTGTGATCTTAAAGGCAAATAATGAGGAAATAAAGAGTCTGTCACTGGAGATCAACTCCAAAGTGGAAGATATTATAAAAGAGAGGAATCATCTGAGGAGGCAGGTGGGCGGCTTGGAGGAGAAGTTAAGTGGTCTGTCCAAGAGTTTGCTCTCAGCTGAGCAGCTTGCAGAAATTTCCACACTCAAGCTCAGCATCCAGGAAACTGCTGAAAACTTGCAGAAGAACCGCCAAACCAACAGCCTCTCAGGATACCTTCCGTACTTCACATCCGATGGGAGCTTCTCAAGCGATCTTCCAGAAGATTGCGGTGAGGTCTTCAGCCGAGGACAGAAATTCAGCGGCCTGTATGCTATTAAACCACACGAGTCAGAAACCTTTCTTGTGAATTGTGAATTCACCGAGGAGGGAGTGTTTACTGTCATCCAGCGCAGACATGACGGCTCTGTGGACTTTGACCAGTCCTGGGAGAAGTATGAGGATGGATTTGGAAACTTCAGCAGTGAGTTCTGGCTGGGGCTGAAGAAGATCTATGCTGTTGCCCGTCAGGGACATTCTCTCCTGCATGTCCAGATAGAGGACTGGAGGAAGGAGAAGCATTTCATGACTTATCAGTATATCCTGAAGGATGCTGCCTCCAACTACACCATCCATCTGAAGCTGCAGTCGGCTGAATCCAGCTCTGCTGTGGATGAACACAGTGGCTTCAGTTTCTCCACTAAAGACCACAACGATGGAAACTATGATCCAAACTGTGCTCAAGATTACACAGGTGGGTGGTGGTTTAGCATTTGTGGCGACATTAACCTGAATGGCAAGTGTATTCAGAGCAGACCTCGTAAAAAGGGAACCCACTGGAAACCTGGCAGGGGAACCACCAGCTTCAAGGCCTCAAAAATCTCCATTAGTCATCTCACAAAGCCACAAACCCCTTAATATAAACAGTATGTGCAGAAACACATACTATCAGGGACTATCAGAGCTCCAATACACATTCATGCTGTATACTGGTTTTTACAAAGTAACCTTTTAATAGAGATGACAATGTTTGTTGAGTATGAACATATAAATAAGTATGTTGAAGTA

Function

NR:

description
Angptl3 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01578642_01584658.mRNA True 1462 mRNA 0.45 6 1578566 1584808

Neighbor

gene id symbol gene type direction distance location
CI01000004_01501609_01545725 NA coding upstream 32447 1501609 ~ 1546119 (+)
CI01000004_01446583_01461259 NA coding upstream 116650 1446203 ~ 1465922 (+)
CI01000004_01426795_01429440 EBNA1BP2 coding upstream 149126 1426795 ~ 1429440 (+)
CI01000004_01377802_01389208 NA coding upstream 189151 1377685 ~ 1389415 (+)
CI01000004_01332533_01345585 SCP2 coding upstream 232558 1331583 ~ 1346008 (+)
CI01000004_01592461_01602968 NA coding downstream 7548 1592356 ~ 1602968 (+)
CI01000004_01623427_01625278 LEPROT coding downstream 38619 1623427 ~ 1625340 (+)
CI01000004_01670419_01699238 PDE4BB, PDE4B coding downstream 85611 1670419 ~ 1699238 (+)
CI01000004_01715623_01744133 SGIP1B, SGIP1 coding downstream 130815 1715623 ~ 1744133 (+)
CI01000004_01750322_01754593 TCTEX1D1 coding downstream 165514 1750322 ~ 1755323 (+)
G25226 NA non-coding upstream 7688 1570619 ~ 1570878 (+)
G25222 NA non-coding upstream 133170 1445065 ~ 1445396 (+)
G25143 NA non-coding upstream 266975 1311043 ~ 1311591 (+)
G25129 NA non-coding upstream 287888 1290222 ~ 1290678 (+)
G25192 NA non-coding downstream 458 1585266 ~ 1585620 (+)
G25242 NA non-coding downstream 119449 1704257 ~ 1704558 (+)
CI01000004_01757017_01757201 NA non-coding downstream 172182 1756990 ~ 1757864 (+)
G25248 NA non-coding downstream 175722 1760530 ~ 1762263 (+)
G25253 NA non-coding downstream 185017 1769825 ~ 1770177 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 1106720 467802 ~ 471846 (+)
G25187 NA other downstream 19734 1604542 ~ 1616470 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 279351 1867166 ~ 1868986 (+)
G25329 NA other downstream 498249 2083057 ~ 2085707 (+)
G25882 NA other downstream 963267 2548075 ~ 2573049 (+)
G25992 NA other downstream 1151728 2736536 ~ 2736768 (+)

Expression


Co-expression Network