CI01000004_01592461_01602968


Basic Information

Item Value
gene id CI01000004_01592461_01602968
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1592356 ~ 1602968 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01592461_01602968.mRNA
CTATAAGGGCACAAGGCTTTTCCTCCTTCTCCTCCCGTCACTCTCTCTCTCCTCTGAGAGGAGATAACAGCTTTTCCTTCATTCTTCCTCAACGTTTCCTCAACAATGAACGATAGTCCCTTGCAAGTGCTGACATTGCCTACCTCTCCATACCCCGACCAGAGGCCTGGAACCAGCGGCCTGAGGAAGAAGGTCCATGTTTTCCAGTCTAAAAAAAACTACCTGCACAACTTCATTCAGTGCATCTTCTCCTCCATCGACCTGCGGGACAGGCAGGGCTCCACTATGGTGGTGGGTGGAGATGGACGCTACTTCAATTCGACTGCCATTCAAGTCATAGTGCAGATGGCTGCTGCTAATGGGGTCAGTTGCAATTCTTACAGTTGTTTTCTTATGAAGAACCACTATATGCTTCTAAATCTCATCCAGAATGGCATCATGTCGACGCCGACTGTGTCTTGTCTGATCAGGAAGATCAAAGCCATTGGAGGGATTATTCTTACAGCCAGTCACAACCCTGGAGGACCTGACGGAGACTTCGGCATCAAATTTAATACTGCCAATGGAGGTCCAGCACCAGAGGCGGTCACAAGCAAAGTCTTCCAAATGAGCAGAATCATAGAGGAGTATGCCATCTGTCCTGAACTCAGAGTCGATCTGGGGACTATTGGCAAGCAATCCTTCGACCTGGAGAACAAATTCAAACCTTTTACAGTAGAAATTGTGGACCCAATTGAATCTTATGCCAACTCTCTGAGGAACATCTTCGATTTTGCTGTTTTGAAGGAGTTGCTATCAGGAGACAACCACATACAAATCCGTTTAGATGGAATGCATGGAGTGATTGGGCCGTATGTGAAGAAGATCCTGTGTGAGGAACTGGGCTCCCCTGCAAATTCAGCCATTAACTGTGTACCTCTGGAGAACTTTGGAGGTTGCCACCCAGACCCTAACTTGACCTATGCCGCTGACCTTGTTGAAACAATGAAGAGTGGACAGTATGACTTTGGAGCAGCTTTTGATGGTGACGGTGACCGTAATATGATCCTTGGGAAGCATGGATTCTTTGTTACCCCCTCCGACTCAGTTGCCGTTATTGCTGCAAACATCTTCTGCATTCCTTACTTCCAGCACACAGGAATCTATACTTGCATCTCGACTCACTCTGCTTTTCTATGCAGGGTGGCCAGGGCCACCAAGATCCAGCTATATGAGACTGCAACCGGATGGAAGTTTTTTGGGAGCTTGATGGACGCAGGTCGTCTCTCACTGTGTGGGGAGGAAAGTTTTGGCACAGGTTCAGATTATATCCGGGAAAAGGATGGGCTTTGGGCAGTGCTAGCATGGCTGTCCATCCTTGCAGTGAGGAGACAAAGTGTAGAAGACATTATGACAGACCACTGGAGAACCTATGGGAGGAACTACTACACCAGGTGTACTATCAGTAAAAGACCACCTCTACATATACAGTCTAGTCAGACATTTCATATTGATGATATATGTACGCATGACAGATTTGATTATGAGGAGGTGGATTTAGATGCGGCTGTGGAGATGATGTTGGATCTTGAGCTGATGGTTTCAGACAAGGCATTCATTGGGCAAGTGTTTACTGTGGGGGAAAAGAAATACCAAGTGGAGGCGGCAGATAATTTTGAATACAGTGACCCTGTGGATGGAACCATTTCAAGAAATCAGGGTTTGCGGATCATTTTTAAAGGAGGTTCTCGCATAATCTTTCGTCTTAGTGGGACCGATAGTTTCGGAGCCACAGTTCGTCTGTATATCGACAGTTATGAGAAAGATATAAACAAGCTCTTTCAGGACCCACAGAAATCAGTAACCATGGAAGCATATGATATGCTGTCCTGCTCTCCGTCGACACAAATCATTACAAACAGCCAGGAGTTAGAGGCTTTGGATGAATTCAGCAAATATACAGAGAGATGTGAAGTCCATTATGGGTCAACAAGCGGTGAAAAAGATTGTCTCGTTCAAGCGCAGGGCAGCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01592461_01602968.mRNA True 2012 mRNA 0.46 11 1592356 1602968

Neighbor

gene id symbol gene type direction distance location
CI01000004_01578642_01584658 NA coding upstream 7548 1578566 ~ 1584808 (+)
CI01000004_01501609_01545725 NA coding upstream 46237 1501609 ~ 1546119 (+)
CI01000004_01446583_01461259 NA coding upstream 130440 1446203 ~ 1465922 (+)
CI01000004_01426795_01429440 EBNA1BP2 coding upstream 162916 1426795 ~ 1429440 (+)
CI01000004_01377802_01389208 NA coding upstream 202941 1377685 ~ 1389415 (+)
CI01000004_01623427_01625278 LEPROT coding downstream 20459 1623427 ~ 1625340 (+)
CI01000004_01670419_01699238 PDE4BB, PDE4B coding downstream 67451 1670419 ~ 1699238 (+)
CI01000004_01715623_01744133 SGIP1B, SGIP1 coding downstream 112655 1715623 ~ 1744133 (+)
CI01000004_01750322_01754593 TCTEX1D1 coding downstream 147354 1750322 ~ 1755323 (+)
CI01000004_01757017_01757201 NA coding downstream 154049 1756990 ~ 1757864 (+)
G25192 NA non-coding upstream 6736 1585266 ~ 1585620 (+)
G25226 NA non-coding upstream 21478 1570619 ~ 1570878 (+)
G25222 NA non-coding upstream 146960 1445065 ~ 1445396 (+)
G25143 NA non-coding upstream 280765 1311043 ~ 1311591 (+)
G25242 NA non-coding downstream 101289 1704257 ~ 1704558 (+)
G25248 NA non-coding downstream 157562 1760530 ~ 1762263 (+)
G25253 NA non-coding downstream 166857 1769825 ~ 1770177 (+)
G25254 NA non-coding downstream 167427 1770395 ~ 1770704 (+)
CI01000004_01332533_01345585 SCP2 other upstream 244182 1331583 ~ 1346008 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 1120510 467802 ~ 471846 (+)
G25187 NA other downstream 1574 1604542 ~ 1616470 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 261191 1867166 ~ 1868986 (+)
G25329 NA other downstream 480089 2083057 ~ 2085707 (+)
G25882 NA other downstream 945107 2548075 ~ 2573049 (+)
G25992 NA other downstream 1133568 2736536 ~ 2736768 (+)

Expression


Co-expression Network