CI01000004_01757017_01757201


Basic Information

Item Value
gene id CI01000004_01757017_01757201
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1756990 ~ 1757864 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_01757017_01757201.mRNA
GAAAAACCTTCAGCATGTTGGCAGAGTGCCTAACTGAGTACTTCCTGAGGAACAATTACATCGACACCTCTGTCCAGAAGGGAGGCATCCCAAAGGTACCAGGCTGCTTGGAGCATACAGGAGTCATCACACAGCTTCTGAGGGAGGCCAGAGAAACTGAGGGCAACCTAGTGGTGCTGTGTTAGACTTGGCAAATGCCTATAGCTCAATTCCCCACAAAGTCATTGAGACTTTGCAGAGGCACCATGTTCCTGAAGGCATCAGAAGACTAATGGGCCATGTACACACTGTAAAGTTTCAGGAGTGACAAATGCATTTAAATGCAGGAGTGTCCCCTAAATTATCATTCCATGTGTGTGGGGAACACGACTCACTACCGAAACTGTGATGACACAGTGGTAACCATAGAAACTTTCTGGCATCTCGCGTGTTTGGTATCCACAATTCCAACCAAAGTAATATTACAGTGACAAAAGACTCATCTCTATTCAGCAATTTTAACTAAAGCACAGTCAAAAGAGGCACTGTGTTTTGTTTAAAGGCTGCTTCACAGAGCGTATTCTTGCAGTGTTGCCATGTCCACTTATTATAAGCATTTTTGGGGTTGTTGTTTAAGCTTGGCTCATACAGCAATCAAGTTTATAAAGTTATTAAAGTGAGCATGTGCAAGTCATGATATTTTGATATTATTTTCAGCATAAAGCATTTCCATTTATTTTGTTTTTTATGGGCTTGTTCTTGTTCGCTGATTTGCTTGCAAGATCTAGCAACACAAGTCCAGCTCGTACCATTTTCCCTGTGATTTCTTGAAACACACATACAGTTGTAAGATACATCTCTGATGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_01757017_01757201.mRNA False 848 mRNA 0.42 1 1757017 1757864

Neighbor

gene id symbol gene type direction distance location
CI01000004_01750322_01754593 TCTEX1D1 coding upstream 1694 1750322 ~ 1755323 (+)
CI01000004_01715623_01744133 SGIP1B, SGIP1 coding upstream 12884 1715623 ~ 1744133 (+)
CI01000004_01670419_01699238 PDE4BB, PDE4B coding upstream 57779 1670419 ~ 1699238 (+)
CI01000004_01623427_01625278 LEPROT coding upstream 131677 1623427 ~ 1625340 (+)
CI01000004_01592461_01602968 NA coding upstream 154049 1592356 ~ 1602968 (+)
CI01000004_01800502_01807872 NA coding downstream 42638 1800502 ~ 1808852 (+)
CI01000004_01823571_01825813 FAM78BA, FAM78BB, FAM78B coding downstream 65707 1823571 ~ 1826766 (+)
CI01000004_01855598_01856473 IMP3.L, IMP3 coding downstream 97487 1855351 ~ 1856524 (+)
CI01000004_01867166_01868986 C7H1ORF21 coding downstream 109302 1867166 ~ 1868986 (+)
CI01000004_01883020_01908403 ABI1B, ABI1 coding downstream 125156 1883020 ~ 1908634 (+)
G25242 NA non-coding upstream 52459 1704257 ~ 1704558 (+)
G25192 NA non-coding upstream 171397 1585266 ~ 1585620 (+)
G25226 NA non-coding upstream 186139 1570619 ~ 1570878 (+)
CI01000004_01446583_01461259 NA non-coding upstream 267140 1446203 ~ 1465922 (+)
G25222 NA non-coding upstream 311621 1445065 ~ 1445396 (+)
G25248 NA non-coding downstream 2666 1760530 ~ 1762263 (+)
G25253 NA non-coding downstream 11961 1769825 ~ 1770177 (+)
G25254 NA non-coding downstream 12531 1770395 ~ 1770704 (+)
G25337 NA non-coding downstream 188062 1945926 ~ 1950133 (+)
G25344 NA non-coding downstream 197521 1955385 ~ 1955605 (+)
G25187 NA other upstream 140547 1604542 ~ 1616470 (+)
CI01000004_01332533_01345585 SCP2 other upstream 408843 1331583 ~ 1346008 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 1285171 467802 ~ 471846 (+)
G25329 NA other downstream 325193 2083057 ~ 2085707 (+)
G25882 NA other downstream 790211 2548075 ~ 2573049 (+)
G25992 NA other downstream 978672 2736536 ~ 2736768 (+)
CI01000004_02745885_02768971 NA other downstream 1000592 2745885 ~ 2769135 (+)

Expression


Co-expression Network