CI01000004_02671199_02727898 (GPR158B)


Basic Information

Item Value
gene id CI01000004_02671199_02727898
gene name GPR158B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 2671199 ~ 2728328 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_02671199_02727898.mRNA
ATGGAGAATGTTTACGGTCCTTGTTGGCGTCGAGGTATGGATGCATTCCTGCTCTGCCTTCTTCTGCTAATGGGAATTGCGAAGGGATCAAATTATGGCTACGTGGAATGGTCTGAGAACGACAAAGATCCTGAAATCAAGGCTAAATATCCAATTTACAGCACCGGGGAGACGATGCACCAGCAGCCGACTATCTCCAGCACCGAGCGAACGGCGGTGGCGCATAAGCTCGAGGAGGATCTGCCGCGGGTGGTCACCGCTTTCCTGCACACGGGGGACTCATCCACCCTGGAGCATGTCAGCTGTTCACGGCGGTATGAGCTGAGCAGTCTCCGCGGTGGAGTTCACGCCGCCTCGCACTCCTCCCTCCACGGCGTCCTCGACACCATGGCGCACGCCACCAACTTCCTAAACATGCTCCTGCAGTCCAACACCTCCAGGGAGCAGCATCTGAAGAGGGATATCCAGTGGTACCACGCGCTGGTGACGAGTATGTTAGAAGGGAATCCTAGAATCCACCGAGCAGTGGTCACATTTCACACGGAGTCTCCCGAGGCGCCTGGTCCGCAGGTGTTTCTTCAGGCGACCAGAGGCGAGGAGCGCATAGTGCTTCAAGATTTGTCCACCACCGCGCGCCATCGCCTTAAAAACAGGACGTCTGAGTCCGACTGGTACAACGAGTTTCGGGACCGAAAGAGACCACAGCGGCTGACCAAAAGTCGAGGCTTTCCAGCAGCCCAGGGCGGATATTTTCTGGACAGAAGTCATGTCAAGTGGTCTGCGCCCTATCTAGAGTGCAAGCACGGCAGTTTTGTGCCGCACTGGCTTTTAACTCTCTCCGCAGGTTTCTATGGCTTGAAGAATAACACGGCGCCAGAGTTTAGAGGAGTTGTACGTGTAGATGTTAATCTACAGGATGTGGACATTGACCAGTGCTCCAGCAGTGGCTGGTTTGCAGGAACTCACCGCTGTAACTTGACAACTATGGAGTGTGAACCGATTGTGGGCCATGGATTTGTGCTGGACAAGTACAAGTGCCAATGCAAAAGAGGTTTCTACCACCCAAGCCGAGTGGTGCTCAATGGCTTCTCAAAATCAGACCAAGGAACATACTCTGATGAATCCTGGGAATTGTCCGGGAGGTGTTTGCCCTGCCAAGAAGGCTGTCAGTTCTGCAGGGATGACACACCATGTCTGGCTCAGGAGGACACTGCCCTCCGCCTTGCCATGGTCTCCTTTCAAGGGTTCTGTATGCTCCTTGACTTCATCAGCATGGTGGTTGTCTACCACTTTCGTCGCAACAAGCGATACTTTCAGGATCTGTACTTCTCTACTTCCCTGACCCGAAGTGGTGGAGAATATAAACTTAAGTTCTTTGAGTGGGTTTCAGTGCAGGAATATGATCTGCTATCGTATGTATTCACTGTGTTGATACTCTTAAAGGTTATGATACAGTATTTTAATCCAAGTGTTTTCCGGTGTATTCTCCTGAGATGGGTCCGTTTGCTCGGCTTTGCCATTGTTTATGGAACAGTGATTCTCAAACTGTACAGGGTTTTAAAAGTGTTCCTGTCACGCACTGCCCAGCGGATCCCGTACATGACCAGCTGGAGGGTTCTGCGTCTGCTTGCTGTGATTTTGCTGGTGGTTGTGTGGTTCCTAGTGGCCTGGACCTCAGCCGTATGCCAGAACCATGACACCCATCATGCCCTCATTGACATCGGTGTCACCCCAGAGGGCCTGCAGTTCAGCATGTGCCTACTGGACAGCTGGGACTACATGATGGCTGCTGCACTAAAACATAGTATGAGACAGATAATAAGGAGGGACACCCCACAAGCGAAATTCCTCTACGTATTAGCATTGTCAAACCAGGGCTATAGCAGAGCACTCATCAAAGCACCCATCCAAAGCGGAGCATACTCGGAGTTCCTGTTCCTGCTGTGGGGCGTCTATTTGTGCTATGCTGTAAGGACCGTGCCCTCCGCTTTCCACGAGCCTCGCTACTTGGCAGTCGCCATTTATAATGAACTTCTCATCTCTGCAATATTTCACATCATTAGGTTCTCTCTTGGCGCTGGGCTGCATCCAGACTGGATGCTGATGTTATTTTTCATCCATACACACCTGACAGTGACAGTTACTCTGGGATTACTTCTCATTCCAAAGTTCTTGTTCACTGGAACTCATACACGGGAGGATATAGCCACAGAGGCTTATGAAGAAGAGCTGGATATGGGTCATTCAGGCTCCTGCCTGAATAGCAGCATAACATCAGCCTGGAGTGAGCACAGTCTGGACCCTGAAGACATTAGGGAGGAGCTCAAGAAACTTTATTCCCAACTGGAGATCTATAAAAGAAAGAAGATGCTGGCTAATAACCCTCACTTACAGAAAAAACGCAGTTCCAAGAGGGGACTTGGACGGACACTTATGCGGCGCATCACAGAAATACCCGAGACGGTGAGTCGCCAGTACAGCCGGGAAGATCGAGATGGAAGTGACCATGGGAGTAACAGAAGCACCCTGAGGAGAAACCCCTTTGACCCGTCTCACTCTGGGAAGTCAAGGGAAGAATCACTGAAGAGCAAGATGTTCTCACTGAAGAGATCTCATAGCTATGACCATACACATGACCAAGGTGGGGAAACCAATGGGGTGCCTGAAGATAAAATGGAGAACTCTACTACTGAGGCTTCTCTGCTTGACACCTTGATGGGCCGGAAGTCCAACAAGAAGAACCCTGAGGTGCCAAAGGTCGAGTTAGCTGAATCTACTGAGTCAGTGCCCTTAGTGTGCAAGTCTGCTAGTGCACACAATTTAGCAGCAGAAAAAAAGCCTGCACATCTTCGGACCTCAATGTTACAGAAGTCACTGTCTGTCATTGCTAGCGCCAGAGAAAGGACGCTGGGCATTGCGGGGAAGACCCACAGTGTGGAAGATGCCAGTAAAAAGGGTCTCAAAGCAAAGGACAGCACAACGCTTTCAGAAGTTGATGAAGCCCCTGAGTGTTTACCAAAAATGATCATCAGCCAGTCGGTTGAGTACACCAAAACGCCTAGTAAGATGGGCATCATGAAGCAGCAGGTGAGCGGCAGTCAGCCCTCCATTTGTTCTGAACCAGGGAAGAGCAAGGACCTGTACGACCTCTCTGAGGTGTGCCCTTGGGAAGTGGAGGAGTTACCCACTCCATCAGAGGGGAAGGCCCAAAAACATGTTTCCATTGCCCCCACCGAAACCACCACGATCCATGGGAGCAGCACAAAAACTGGACACAAGTCTCAACACAAACAAAAAGGTTTGGGCCAATCTCCTTCAAATCGCCGTCGCTCCAGAGATAAGACTGGGGACAGGGATGAAGGGAGGAAACCCAAATCACCTCTTAACCTCACTGCCCACAAAGACGCTAGTCCGTGGAACTTCGAGGATCCATCGGTCCAACCAATGGAGCCTGCAGGACTGTCCCCTGAGAGAACAAGACGCAAGAAAAGTGTCACACCCACAGATGGAAAGCCCAAGATAGTCCTCTCAGATATCTCAAAGTCCACAGGAAGCCTTTTGCAGCCTCCAGCTCTCATGGTGGATATCTGCCCTTGGGATTATGATCCCCCTGTGTCTCCCAACAAGGACAAGACTTCCAGCCCCACACACCATTCAAAGAGAAGAGATTCTTGCTCGAAAAGAAAAGGATCCTGCTCTTCCAAAGAGAAAGCTAAGGATAAAGAGGATGATAAACGAATGTCCAAGTGCAAGGAGCGGAGAAGCTCCTCAAGCAAACCCTCTGAGAAACGACGCACAAGCCAATCATCAGAGGGAGACCAAGTTGCCACAATGGCATCTGGCAGGAGAAGGAGCTCTACTAGAGACACCGCCATCAGCAGCAGTAAACGTGCTGACGTTTGTCCCTGGGAGACAGAGGCATTGCCAAGTGTTACCTCAAATGATAAACACCCTCCAACAACTGAGAACCACACAACACAAACACCACCCACTTACCTCAACATGGCTGAAGTTTGTCCTTGGGACTTTGATGAGAAGTTGTCAGGGAATAGTGCATGACACAGTACTTACAAAATTAGACCACTCCAGTGGGATTTCTGAGATGACAGATTCCATTTTTGAAAGGACTGTTCACACCAAGAAAGTTAACTGTAATAATAATTGGCTTCCACACCAACACCAGACGATAACACTCTGTATATTATAAGCGAGCGCTGCAATTATGTCATCTGCTGCTTTAAATACTCAAGCTCCTTAAAGTCGGGTGGATTCTGACAGTGTTTTTATCATTCATCAGCTGGAAAAAAAATCGTTCGTGATTCCAATGTTATCATTCCTCTGTTGTTAACGTTATAGCTGTGGTCTGGACTTTGCTATTCTTATAGAATTTGAACAATTATTAAAACTTTATAGTTATCGTTATAGTTATCGTCCTTGGTGTGCACGGGCCTTTAGCCTCATGTTCCCACTTATTTACTTAAAGTTTTCA

Function

symbol description
gpr158b Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human GPR158 (G protein-coupled receptor 158).

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_02671199_02727898.mRNA True 4489 mRNA 0.49 13 2671199 2728328

Neighbor

gene id symbol gene type direction distance location
CI01000004_02528689_02568243 NA coding upstream 101972 2528689 ~ 2569227 (+)
CI01000004_02143355_02186281 BCL2B coding upstream 484428 2142676 ~ 2186771 (+)
CI01000004_02126757_02136937 KDSR coding upstream 533851 2126466 ~ 2137348 (+)
CI01000004_02116310_02120268 VPS4B coding upstream 550839 2115937 ~ 2120360 (+)
CI01000004_02068075_02072887 NA coding upstream 597138 2067958 ~ 2074081 (+)
CI01000004_02745885_02768971 NA coding downstream 17557 2745885 ~ 2769135 (+)
CI01000004_02865415_02867952 NA coding downstream 136525 2864853 ~ 2868369 (+)
CI01000004_02903759_02904287 NA coding downstream 175431 2903759 ~ 2904324 (+)
CI01000004_02906581_02908320 IMPAD1 coding downstream 178151 2906479 ~ 2908320 (+)
CI01000004_02948465_02951235 PENKA coding downstream 218888 2947216 ~ 2951743 (+)
G25884 NA non-coding upstream 25537 2644190 ~ 2645662 (+)
G25914 NA non-coding upstream 58731 2611213 ~ 2612468 (+)
G25885 NA non-coding upstream 144371 2482508 ~ 2526828 (+)
G25871 NA non-coding upstream 188842 2474371 ~ 2482357 (+)
G25873 NA non-coding upstream 197005 2459864 ~ 2474194 (+)
G26014 NA non-coding downstream 43313 2771641 ~ 2771878 (+)
G26015 NA non-coding downstream 45977 2774305 ~ 2774560 (+)
G26017 NA non-coding downstream 47242 2775570 ~ 2775981 (+)
G25982 NA non-coding downstream 48041 2776369 ~ 2777255 (+)
G25986 NA non-coding downstream 49426 2777754 ~ 2779182 (+)
G25882 NA other upstream 98150 2548075 ~ 2573049 (+)
G25329 NA other upstream 585492 2083057 ~ 2085707 (+)
CI01000004_01867166_01868986 C7H1ORF21 other upstream 797841 1867166 ~ 1868986 (+)
G25187 NA other upstream 1054729 1604542 ~ 1616470 (+)
CI01000004_01332533_01345585 SCP2 other upstream 1323025 1331583 ~ 1346008 (+)
G25992 NA other downstream 8208 2736536 ~ 2736768 (+)
G26245 NA other downstream 780689 3509017 ~ 3522393 (+)
CI01000004_03550525_03552621 PTGER4C other downstream 822720 3550329 ~ 3553423 (+)
G27805 NA other downstream 2644497 5372825 ~ 5373803 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location