CI01000004_03119968_03122260


Basic Information

Item Value
gene id CI01000004_03119968_03122260
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 3119968 ~ 3122260 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_03119968_03122260.mRNA
ATGCACCAGGCTCTACAAAAGCTTTGATGCTCACTGATGGACTCATTGATTCTGTGGACAACATGGTTCTTTCTGATTTAACCAACATGAGTGTTCTGGCACTCAGCAACAATGCCATTTCCAGCATCATGCAGGATGCATTTCAGAATCTCACTTTCCTTACAACACTGTCGCTGGACCACAACCGCATCTCCAGTCAAACCCTGGACAACTCCACGTTCTCCTGGCTTCACAGACTGGAGACTCTCCAGCTGGGTAACAACGATCTGAAAGACATTGATGGCTCCTGGTTTCAAAACTCTAGAGCTTTAAAAACACTTCAGCTAGAGGGGAACCACTTTACAGTCTTGAACTCCACCACCTTTGCCCACGCGGACCTGAGGAACCTGGAAACGCTGGACTTGTCCGACAACCTCATTGTGTACATAGGCAGTGATAGCTTCCGAGGGATGCCTAGTCTCCGCAGCCTTGATCTGTCCCGAAATCATCTACGCAACGCTCCGGATGCCTTCTCATACCTGTCATGGCTCTCTGTGCTGAACCTTGATTTGAACCACTGGAGCTGTACGTGTGAGTTGAGAGAGCTGGCCTCATTCCTCAACAATTACATTCAGGCTCCTGATAAAGTGTTGTACAATGGGCAGAGGATGGTGTGTGTGAATACAGATAATCCAGCTGTGCAGACTGTGCTGGAGCTGACTGATGCTAACTGTGTCCCACCAAACAGGAATATCACAGTGGAGGTTGTGGCTAAAAGTAATAACACTTCTCAGCAATATATTAGAAATGTTGCTATTGCCATTGTGTTTTCATTTTTCGGTGGTGTTGGGATCACCCTGGGACTGATTGCCATTGCATACCACAAACTCAGTAAGAAATTTAAACTTGTTCAGGAGGAGGGTAGAGCTGGAGAAAGGAACACATCCAGTCCGGAATCAACCCAGTGGAATTTCTGCGAAGGCAAGGACACTCTATCTATGAGCCATGCGCTCTACAACAGCAACTACAAATCCCATCAGCCCTGGGAGAGAGAAGACTCTCCTTATCTGGGATCAGACGCGCTAGAGAATCATTTCACCTGCCACAAGTGCAGCTCTACAGCCCTTGCCATAGGAAAGCACAAAAGAGAGATTGTCCTGCATGGAGCCAATCATGTGAGTGAACAGCTGGCTAATCACCAACTAAAAGGGAATGATCAACATTCTGTGTTGCAACAAAGGATCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_03119968_03122260.mRNA True 1227 mRNA 0.47 2 3119968 3122260

Neighbor

gene id symbol gene type direction distance location
CI01000004_03110546_03114901 CRYZ coding upstream 4357 3110546 ~ 3115611 (+)
CI01000004_03051206_03066124 SLC44A5, SLC44A5A coding upstream 53380 3051206 ~ 3066588 (+)
CI01000004_02955707_02959931 SDR16C5A coding upstream 160037 2955530 ~ 2959931 (+)
CI01000004_02948465_02951235 PENKA coding upstream 168225 2947216 ~ 2951743 (+)
CI01000004_02906581_02908320 IMPAD1 coding upstream 211648 2906479 ~ 2908320 (+)
CI01000004_03124603_03125975 NA coding downstream 2343 3124603 ~ 3126107 (+)
CI01000004_03126603_03131458 FAM151A coding downstream 4234 3126494 ~ 3131561 (+)
CI01000004_03177552_03184142 NA coding downstream 55292 3177552 ~ 3185057 (+)
CI01000004_03197795_03203130 CDCP2 coding downstream 75535 3197795 ~ 3203130 (+)
CI01000004_03206527_03212826 CDC7 coding downstream 84267 3206527 ~ 3212954 (+)
G26147 NA non-coding upstream 22814 3096857 ~ 3097154 (+)
G26128 NA non-coding upstream 49730 3070002 ~ 3070238 (+)
G26063 NA non-coding upstream 50182 3069460 ~ 3069786 (+)
G26059 NA non-coding upstream 121994 2995491 ~ 2997974 (+)
G26099 NA non-coding upstream 167650 2951897 ~ 2952318 (+)
G26159 NA non-coding downstream 60224 3182484 ~ 3236444 (+)
G26171 NA non-coding downstream 95562 3217822 ~ 3218778 (+)
G26182 NA non-coding downstream 144217 3266477 ~ 3266688 (+)
CI01000004_03267663_03271388 NA non-coding downstream 145003 3266719 ~ 3271562 (+)
G26184 NA non-coding downstream 157633 3279893 ~ 3280094 (+)
CI01000004_02745885_02768971 NA other upstream 361030 2745885 ~ 2769135 (+)
G25992 NA other upstream 383200 2736536 ~ 2736768 (+)
G25882 NA other upstream 546919 2548075 ~ 2573049 (+)
G25329 NA other upstream 1034261 2083057 ~ 2085707 (+)
CI01000004_01867166_01868986 C7H1ORF21 other upstream 1246610 1867166 ~ 1868986 (+)
G26245 NA other downstream 386757 3509017 ~ 3522393 (+)
CI01000004_03550525_03552621 PTGER4C other downstream 428788 3550329 ~ 3553423 (+)
G27805 NA other downstream 2250565 5372825 ~ 5373803 (+)
G28165 NA other downstream 2610329 5732589 ~ 5733001 (+)
G28302 NA other downstream 3347768 6470028 ~ 6502087 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location