CI01000004_03126603_03131458 (FAM151A)


Basic Information

Item Value
gene id CI01000004_03126603_03131458
gene name FAM151A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 3126494 ~ 3131561 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_03126603_03131458.mRNA
AGATAAAAAGCAGTTTGGACCTCAGAAAACAAAACATGACACTCTGGGAGAGTCATTGTGCAGCTTATGTACATCGAGTGAACATTTAGAGATCTGATACTGAAAAACGATGGACAACAATGAAGAAAAGAACTGCAACAATGAGGAGGCTGAAGAGGGAGAAAGAAAAGAACCAAAAACATTTATGGGGATCTTTACAAGAGAGCAGTTCATCATGTTATGTATTGGTATCGGTCTGATTGCACTTCTTCTCATTATTACTTTAACTTCAGTATTTGTGATCATGAGATCAGATGGTTCAGTCGACATGGACATGGAGCCTTTCCCATCTGGTGGAGACATGCTTGACTTTCTTCTCCAAACTGGAGAGATTCGGGAGAAAGATGGTCTTTATGCAACATGGTATCACGCAGCCAACAATAAATCTGAGATGAACAAGGCCTTGAACAGTGATGTCATGATCCTGGAGGCTGATATAAATGTGCAAGGTCATAATACAGTCAATGAAACGAATATTCCCATCATGGCCCATCCACCAGACATATACAGTGACAACACTCTGGAGGAGTGGCTGGATGCTGTACTCAAATCAAAGAAAGGGATAAAGCTGGATTTTAAGAGTATTAATGCTGTGGAGCCCTCATTGGATTTGCTGCGAAAGAAAAACCAAACGGGGATCAATCGCCCAGTGTGGATAAATGCAGATATTCTTCCAGGTCCTAATGTCCCCGATTTCTGGCCAGTGATCAATGCTTCTGAGTTTTTTGAGCTCATTCAACTGAAATTTCCTGACGTCACCATCTCTCCAGGATGGAAGGTTCTTTATCTTTCCATCTTCCCAAATGTGACATACACACGCAGTATGGTTGAGGAGATGTACTCTACTGTAAGACACCTCCCTCAGAAAATCACCTTTCCTGTCCATGCTTTGATGGCCAAGAATGGGTGGCCACATCTGAGCTGGCTGCTCAGCCAATCTTCAAGAGACAACAGCAACCCTCAGCACATCTATTATGACATCTATGAGCCTGTGCTCTCACAGTTCAAAGAAGCTGCAATGCTGAGAAACAGACCCAGAAGATTCTATCCAGGTGGAGACATAGTTGACTATTTCAGGCCGGTGAATGGTGATGGACTCAACATCCAGTGGGACACAGTGACTGATAAAGATTCTTTGCTATCTCTGCTTGAAGATAGCCCTGGAGGAATGCTGGTGATCCCAGTACTATCTAGCGTAGGTCAACCAAACATTCCTGTCATTCAGGGTTCCCAACCTGAGTTGCCTCTTCAGGACTGTCTGGAGCTGATTCTTGCCTCTAAGAAGCCCTGGGGACTCTACTTAAGGATAAAGTCTCAGAATCATCTGAGCCCCTCACTGGAGCTCCTTCGTCAGGCCTATGACAGAGACCTGCTGCACCACCCCACCTGGGTCAACATGGACGTAGCCCATGGAGCTTTCCATATCCACGGCTATATAATGGGAGAAGAGTTCTTGAGAACCATTGATCAAATCTTTCCATATGTGACTCTGGCTCCAGGTTGGCCTAAAGAGGTCCTCAATGAAGGCTACACACCAGAATTAGTGGAGGACATGGTGCAACTCTTCCAGGGGGCCTGGCAAGATGTTTCACTGCAGCTGCAGGTCGAGGCTTTGGAAAGGACTGTGACTGGATACAGGAGCCTTATCCATGCGCAATCACGCTTCTCACTGACTCTAGAGCAGTGGGCAGAGGACAGAGGCCTCAGTACTGAGACTGCAAGATTAATGTCTATTCGAACAGCAAACAGACAGCGGAGCTTCTACAATATGCCTAACATGTACAGAGAACATATAGCAAATCTGTCAGTCTGGATATCAAGATCATAAACCATTGACCAAAATGAAAGTCAATCATAGTGCTGTTTAAATAGTCCACAGACAATATATATACATAAATGTTCATTGAAAATGTGAAAAATGTATATTTAAA

Function

symbol description
fam151a Orthologous to human FAM151A (family with sequence similarity 151 member A).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_03126603_03131458.mRNA True 1970 mRNA 0.44 8 3126494 3131561

Neighbor

gene id symbol gene type direction distance location
CI01000004_03124603_03125975 NA coding upstream 387 3124603 ~ 3126107 (+)
CI01000004_03119968_03122260 NA coding upstream 4234 3119968 ~ 3122260 (+)
CI01000004_03110546_03114901 CRYZ coding upstream 10883 3110546 ~ 3115611 (+)
CI01000004_03051206_03066124 SLC44A5, SLC44A5A coding upstream 59906 3051206 ~ 3066588 (+)
CI01000004_02955707_02959931 SDR16C5A coding upstream 166563 2955530 ~ 2959931 (+)
CI01000004_03177552_03184142 NA coding downstream 45991 3177552 ~ 3185057 (+)
CI01000004_03197795_03203130 CDCP2 coding downstream 66234 3197795 ~ 3203130 (+)
CI01000004_03206527_03212826 CDC7 coding downstream 74966 3206527 ~ 3212954 (+)
CI01000004_03223283_03238063 RPAP2 coding downstream 91352 3222913 ~ 3238081 (+)
CI01000004_03267663_03271388 NA coding downstream 135158 3266719 ~ 3271562 (+)
G26147 NA non-coding upstream 29340 3096857 ~ 3097154 (+)
G26128 NA non-coding upstream 56256 3070002 ~ 3070238 (+)
G26063 NA non-coding upstream 56708 3069460 ~ 3069786 (+)
G26059 NA non-coding upstream 128520 2995491 ~ 2997974 (+)
G26099 NA non-coding upstream 174176 2951897 ~ 2952318 (+)
G26159 NA non-coding downstream 50923 3182484 ~ 3236444 (+)
G26171 NA non-coding downstream 86261 3217822 ~ 3218778 (+)
G26182 NA non-coding downstream 134916 3266477 ~ 3266688 (+)
G26184 NA non-coding downstream 148332 3279893 ~ 3280094 (+)
CI01000004_02745885_02768971 NA other upstream 367556 2745885 ~ 2769135 (+)
G25992 NA other upstream 389726 2736536 ~ 2736768 (+)
G25882 NA other upstream 553445 2548075 ~ 2573049 (+)
G25329 NA other upstream 1040787 2083057 ~ 2085707 (+)
CI01000004_01867166_01868986 C7H1ORF21 other upstream 1253136 1867166 ~ 1868986 (+)
G26245 NA other downstream 377456 3509017 ~ 3522393 (+)
CI01000004_03550525_03552621 PTGER4C other downstream 419487 3550329 ~ 3553423 (+)
G27805 NA other downstream 2241264 5372825 ~ 5373803 (+)
G28165 NA other downstream 2601028 5732589 ~ 5733001 (+)
G28302 NA other downstream 3338467 6470028 ~ 6502087 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016201 fam151a coding NC_007113.7 CM002886.2 11069055 ~ 11082914 (-)