G30877


Basic Information

Item Value
gene id G30877
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24714697 ~ 24714998 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45676
AAAATATCTAGGAGTGTATGTTGGCAATAATCTAATGCTAAGTAAAAATTGGGAAGATGTTCTAGATAAAGTAAAAGGACGATTGCAAAAATGGAAATGGCTCTtgccaaaaatgtcttttagagGGAGggttataataattaataatctgGTGGCTTCAGTGATGTGGCATCGTTTGGCCTGCATTGATCCTCCAAATGGACTTTTGAGCAGAATTCAAGCCTTTCTAGTGGACTGTGGCGGACAGGCCCGCGGAGGACCGTCCTGTGGTGGACAGGCCCGCGGAGGACCGGCCTGTGGCG

Function

NR:

description
PREDICTED: rho GTPase-activating protein 39 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45676 True 302 lncRNA 0.46 1 24714697 24714998

Neighbor

gene id symbol gene type direction distance location
LOC122342991 LOC107685875,LOC107570416,LOC107671223,LOC107749047,LOC107728228,LOC107569032 coding upstream 26717 24679922 ~ 24687980 (+)
LOC122343104 NA coding upstream 42546 24667706 ~ 24672151 (+)
LOC122343093 NA coding upstream 49121 24661829 ~ 24665576 (+)
LOC122343105 NA coding upstream 61482 24648967 ~ 24653215 (+)
LOC122342946 NA coding upstream 95306 24607037 ~ 24619391 (+)
LOC122342420 LOC107667978,LOC107563545 coding downstream 55634 24770632 ~ 24782341 (+)
zmp:0000000926 LOC107754864,LOC107661991,LOC107568831,LOC104958731 coding downstream 802398 25517396 ~ 25553833 (+)
l1camb LOC107661992,LOC107746188,LOC107598812,LOC107568828 coding downstream 858079 25573077 ~ 25609845 (+)
lsm14b lsm14b,LOC107748998,LOC107569639 coding downstream 916363 25631361 ~ 25634808 (+)
ogfr ogfr,LOC107706812,LOC107690085,LOC107713566,LOC107677637,LOC107598801 coding downstream 988833 25703831 ~ 25709637 (+)
G30812 NA non-coding upstream 227810 24456022 ~ 24486887 (+)
LOC122343172 NA non-coding upstream 295129 24417843 ~ 24419568 (+)
G30819 NA non-coding upstream 400409 24310339 ~ 24314288 (+)
G30754 NA non-coding upstream 704806 24003642 ~ 24009891 (+)
G30751 LOC107671223,LOC107569100,LOC107575457,LOC107747635,LOC107679413,LOC107566978,LOC107670352 non-coding upstream 713133 23978432 ~ 24001564 (+)
G31223 NA non-coding downstream 273869 24988867 ~ 24989274 (+)
G31226 NA non-coding downstream 599225 25314223 ~ 25314596 (+)
G31228 NA non-coding downstream 600181 25315179 ~ 25315553 (+)
G31380 NA non-coding downstream 1072382 25787380 ~ 25787901 (+)
G31388 NA non-coding downstream 1102033 25817031 ~ 25817564 (+)
LOC122343086 NA other upstream 40285 24672891 ~ 24674412 (+)
LOC122343125 NA other upstream 68096 24639089 ~ 24646601 (+)
LOC122343159 NA other upstream 76043 24636352 ~ 24638654 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other upstream 243247 24465454 ~ 24471450 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other upstream 248297 24454270 ~ 24466400 (+)
G30882 NA other downstream 6426 24721424 ~ 24728447 (+)
LOC122342408 NA other downstream 28850 24743848 ~ 24767552 (+)
LOC122342771 ss18l1,LOC102784650 other downstream 920044 25635042 ~ 25688230 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other downstream 978804 25693802 ~ 25695381 (+)
G31384 NA other downstream 1097633 25812631 ~ 25813625 (+)

Expression


Co-expression Network