LOC122342357


Basic Information

Item Value
gene id LOC122342357
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25974877 ~ 25977623 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236137.1
ATCTGACAATGGTGCAGACCAaatcagtaaacagtaaaatttacatttttcagattgAGAAATGCCCCCTGCAAGCTCATGGACAGACCACCCTCTTTGGTGGGTCCAAGGCATGCAGTTGTGGATTCCACACCACCAagCCTGCCACTGCTACTTTATCACAGGCCACTGCTGCACCTCCACAATCTGAGGCTTCAGACACGGCTCCTGCCCCACGGTCATTCCTGAGGCCCTCTTCTACTTTATCAATGtTCACTAAATCACGGTATAGTGGGTCACAGTTGTCTTCACTAAAGCCCAATTTAGTAGAACGGAAGACCCCAGCCCTTCTCCATCCTCTGACCCCAAGTGCTTCTCCTCCCAGCCCCCTCACCTTCTCCATCCTCTGTGAGGACTCAACCGTGGCCACTGTGAGAACCCCTCGCCCTTTTCCATCCTCTGTAAGGACGGcaagctcttcttcttcctctccgAGACCTCCCAGCCCATCCTTACTGCAGACCCACGTTCCTGCTCCATTCTCTGAGGAGCCTAGAAGAGTCCAGCCAACCCCTGCCGAGGACTTAGCTTCAGTCAGGCTACCAGTTGAATTAGGCAAGACCATCCCTGTGCAGGACCAAAGGTGGATTGccaacactttatttcactCTGGCAAGCTGCGGCCAGATTTGAAGCTGTGGTATGAGCCTCCCATCCCGGCCCTCATTTACCACCAGACACCAACACCTGACCGGTTCTTTACCCATCGGCTAATGGTGTGGATGCCCTACCACCTGTGGAAGGTGACGGTTCACTGTCCGGCTTGTAACAAGAACCTAACAGGTTATGGTGTCCACAAAAGGGCCAGGAAGGTCCTGGATATTGACAGGTACTACCTGCTGGTGACAGAGACACTCAGGTGTACTGTGTGTTCTCAAAACTATCTGTCAACAAGCCAGACTCCTGTATCGGTGGTCTGCCAGGAGCCTCCAGAGCCAATCGACATTCCCACCAGTCGTTGGCTGCTATCACAAAGAAGCTGGCGGCCATGGACGGGGACAGCACTCTGGGTAACCTCCATTGGAAATGAGGTTGGCCAGATAGTGACCAGTGTGCTGTCAGTGCAAGAGGGGCCAGGACTGAGCAGAATGGTGGCTGGTGTAATGGAGCGCTACCGCCAAGGCTGCCATTCCACCACCAGTGCTGCTTTATGTGGACTGTGGCTGCTGCCCTGCATTTTTGAGTGGGACGCTGGAGACCTCAGTCTGTTGCGGCAGGCAAAGAGGAAACAGATGATGGCGGAAGGTTTGCCAGCTATTACTGACATCCTGGTGGACAGAAGCATCAGTAAAGGAGCTGAGCCTTTACTGCCGCGGGGAGGACACGAGGTGAAGAGGCCACCATACGCCTCATGGAGAGGCTGCTGCAGGACCTGGGGGGGGTGCAAGCGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236137.1 True 1433 mRNA 0.54 8 25974877 25977623

Neighbor

gene id symbol gene type direction distance location
trnah-gug_3 NA coding upstream 65493 25909313 ~ 25909384 (+)
trnas-uga_24 NA coding upstream 66299 25908497 ~ 25908578 (+)
trnas-aga_26 NA coding upstream 66645 25908150 ~ 25908232 (+)
trnak-uuu_25 NA coding upstream 67457 25907348 ~ 25907420 (+)
trnas-uga_23 NA coding upstream 67639 25907157 ~ 25907238 (+)
trnaa-agc_2 NA coding downstream 21200 25998823 ~ 25998895 (+)
trnaa-agc_3 NA coding downstream 31422 26009045 ~ 26009117 (+)
trnaa-agc_4 NA coding downstream 53998 26031621 ~ 26031693 (+)
trnak-uuu_33 NA coding downstream 68053 26045676 ~ 26045748 (+)
trnas-aga_39 NA coding downstream 68855 26046478 ~ 26046558 (+)
trnas-uga_30 NA non-coding upstream 23159 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 25372 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 25718 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 27662 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 28006 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 183868 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 190276 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 192896 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 458725 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 465883 26443506 ~ 26443991 (+)
G31384 NA other upstream 161252 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 279496 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 286647 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1207325 24743848 ~ 24767552 (+)
G30882 NA other upstream 1246430 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1319913 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1379189 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1383220 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2229335 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2241110 28218733 ~ 28221417 (+)

Expression


Co-expression Network