LOC122342360


Basic Information

Item Value
gene id LOC122342360
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26173194 ~ 26177618 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236141.1
gaggaagagggcaaagactgtctcaagttgatccggatgtttgtttttattgcaaaaagccCGGACATTGGAAAAATGAGTGCCCGCTTTTGAATAGACACACGGCGGCTGCTGCGGCAAAGTCTAAACCGAAAGCAGATTGACGGCAGAGTGCGAGAGAGGAGGGGGGAGTTGAGAGCAAAGTCTACGGCGACCACACTTCAGTAACAGataagtttgacacacacacacccacatctgacactgcgaattgcaatgaagaaatgcttgctgcgaattgcaatgaagaaatgcttgctgtcatacacgattgcattgctaaattagaaaatgagaaatctttcagacaaagagaATTAGGCACATATACTCATTTGAATGACTTAGCATATCAACAAATGCCAGAGGTTAGCTTATGGGTAGACGGAAttgaaagggtgtttttagcTGATACGGGGGCCACGAGTTCAGTATTAAGGATAAATGAGTTTACCTCTGTCCCCAAATTGAGTGGAAATTTTGCATGGACGATTTCTGCATCTGGTCATACTGTTAAAGAGAATTATACAGTCCCTCTGAGGTGTAAAGATGAGAATGGTGCAAGTTTCAGACACAGCTTCCTCCTCTCACAGCACTGTCCAAAAAATCTGCTGGGGAGAGATTTGTTGTGCAAACTGggtatttctctaatatctggtccagaaggtgtgaaagcagttcagtgccaaattcaaactctgactgcaatCCAACATACACCACTATACGTTTATCAATGGAAATTGCAAGATGATGAATTATGCGAAAGTCTTGTCAATGGCGCTAAAGACAGAGTTTCgcctgattctgattttatgccaTTCTCAGACTTACATTGCTCAGCACATGTGTCTCTGGCTAGAGACGAgttgtttgaacagaaatggtttCCACGTATTGAGATATTGCAATTGAATTGGctaatttggacagaaaataaatgtgctgctgctgttgcattaaccgatgaacagcaggtgttttttgatgttgtggattCTTTTCCCCATGTGTCGTTGTCGAAAGGGAGCGACAATCGTTGGGAAGACATTGGTCCCTTTGTAAAGACGTGTATCTTTCATGAAAATTGGTTGCGGactgctgagaaaaatgttgaatataatccaaCTCTGTCTGCATATCGAACGAATTTGACTGAGCCTGCTGCGATGGCTGAACGCACAGTTCATGTGAGTGAAAGTGCATTACCCAATCACTGCTTccttacagaaactgaaatggaaagcattccagctctcaaggaagttccaaagactgtttgggcttcttctaaatatgacgtggggttgatcaagaattgtgaccctattcaaattattccaaaatctgattacagacCATGCAAACCTCAATATCCTTTGAAAAGGGAAGCTATTGAGGGAATCAAGCCAGTTTTTGAGGCATTGAAAAAGGCTGGAGTGATTGTGGAATGTGAGAACTCTCCTGTGCGTACACCCATCTTTCCTGTCAAAAAGATAAGAGACGCAGACCAGCCGGTTGAGTGGAGGTTTGTGCAAGACTTGCAGGCTGTAAATGATGCAGTTCAGACACAGGCTCCTATTGTTCCCAACCCGTAACTCCTATCACAAATACCAGGTGATGCTGAATGGTTTTCGGTTGTTGATCTTtccaatgctttcttttctgtgccggttcataaagacagccaattttggtttgctttcaattttaatggCAAACCTTACACTTTTACTCGACTTTGTCAAGGATTCAAAAATTCGCCTGTATTGTTCGGCGAGGCACTGAAGAGaagtttggaaacattacaattggcaccagggtcagctttaattcaatatgtcgatgatctcttaataacagccagagatgaagaaacttgtacacaggacactgtaaagctgttgaaacatttggctgttgaaggccacaaggtcagtttgtcaaagttgcagtttgcaaaaaggGAGGTGACGTTTCTAGGTCACATTGTCAACAAGCAGGGAAAATCTCTAACACAAAAGAGAATAGAGgcaattcaaaagattccaaagcctctgacaaaaaagcagctcatgtcatttttgggaatgtgttcatattgtagaacatttattcccaactatgccattgaagagtcaccttCTATGCAGGGTTTCGCaacaccagaagagaaaaaacaatgggTGAAGGCCGAGTGCAAGCTGAAAGACAACatctctcaacAGGTCAAGGACGCTCTACCTAAACCAGCAGAAGGATTTCTGCATGACATCAGACCTGGTGATTTTGTGGTGGTCAAGGATTTCAGAAGGAAACATTGGAAATCAAGGAGGTGGAACGGCCCGTTCCAGGTCCTGCTGATAACGCACACTGCGGTTAAGGTGGCTGAGAGGGCTACGTGGATACACGCCAGCCACTGCAAGAAGGTCCCACCACCACCAGAGGGAGACCCAACTcaataa

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236141.1 True 2504 mRNA 0.43 4 26173194 26177618

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_68 NA coding upstream 14315 26158807 ~ 26158879 (+)
trnah-gug_14 NA coding upstream 14627 26158496 ~ 26158567 (+)
trnak-uuu_67 NA coding upstream 16441 26156681 ~ 26156753 (+)
trnah-gug_13 NA coding upstream 16755 26156368 ~ 26156439 (+)
trnak-uuu_66 NA coding upstream 18571 26154551 ~ 26154623 (+)
LOC122343899 NA coding downstream 5617 26183235 ~ 26183375 (+)
LOC122343900 NA coding downstream 8231 26185849 ~ 26185989 (+)
LOC122343901 NA coding downstream 10840 26188458 ~ 26188598 (+)
LOC122343908 NA coding downstream 13450 26191068 ~ 26191207 (+)
LOC122343902 NA coding downstream 16046 26193664 ~ 26193804 (+)
LOC122343909 NA non-coding upstream 2538 26170519 ~ 26170656 (+)
LOC122343906 NA non-coding upstream 5155 26167899 ~ 26168039 (+)
LOC122342452 NA non-coding upstream 9797 26161491 ~ 26163397 (+)
trnas-uga_30 NA non-coding upstream 221476 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 223689 25949424 ~ 25949505 (+)
G31403 NA non-coding downstream 258730 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 265888 26443506 ~ 26443991 (+)
G31412 NA non-coding downstream 301098 26478716 ~ 26478933 (+)
LOC122343359 NA non-coding downstream 591313 26768931 ~ 26769820 (+)
G31420 NA non-coding downstream 601675 26779293 ~ 26779606 (+)
G31384 NA other upstream 359569 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 477813 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 484964 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1405642 24743848 ~ 24767552 (+)
G30882 NA other upstream 1444747 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1119918 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1179194 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1183225 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2029340 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2041115 28218733 ~ 28221417 (+)

Expression


Co-expression Network