LOC122342369


Basic Information

Item Value
gene id LOC122342369
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27004701 ~ 27006306 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236148.1
TCAGCCTGCTGCCTCCTCCATGCCAGGTGCATCAGAATCTGTGCTCTGTGCCATTCACAAAAGCCCAAAGAAGAAGGGGGTTGGCACAGTGTCGAGGTGGGACCTCATCTTGGAGGACTATAAAAAAATCAGGCAGCGCATTCTGACCAATGCCGCCGTTATGCAGCAGATCACCTTGCAGCTGGTGAATGTGAGCCACACCACACTGGTTCAGTGGCACAACAAGAGGGTGAAAAGGCAGGACAGCGCAGTTTTGATGCAAGGGCTGCAACTGCCTAGCCGTTTGTCTGTGGCAGCCGACCCTCTACCCTCTGCCAATGTGCGCCCCCCATCTCTGCCCCCCCAAGCAGGACCATCTCACCAATACCACCTGCCCAGTAGCACTGTGGGCCAGGCACgtgtgaagaggaagaggaacatCGCTGCAGCGGAGATACCTCAAATCCCTCGGCGACTTTTACCTGCTCCACTCCCAGGTGCTCAGCTGGTGATGCTGGCTCCATTGGCCTCGCAGGGACTAACAGGGCGTCCTGCTCCAGCTCGTGCTCCAGTTAGAAAACTGACCCGCAGAGTAGAGCACAATACGTGTAAAAAATGTGGGCAGTTTAGGACAGTGGAGACTGGGCACAGCCAATACAAGGGCATTATATACTGCCCCTCTGTAGAGACACTACCAAAGCAGCAGTGGTtggagaatattaaaaaaactaaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236148.1 True 715 mRNA 0.54 2 27004701 27006306

Neighbor

gene id symbol gene type direction distance location
trnay-gua_25 NA coding upstream 74063 26930552 ~ 26930638 (+)
LOC122342366 LOC107709221 coding upstream 237528 26764953 ~ 26767173 (+)
trnav-aac_2 NA coding upstream 357744 26646885 ~ 26646957 (+)
trnav-cac NA coding upstream 359744 26644885 ~ 26644957 (+)
trnav-aac_1 NA coding upstream 360497 26644132 ~ 26644204 (+)
trnas-aga_109 NA coding downstream 2315 27008621 ~ 27008702 (+)
trnas-uga_107 NA coding downstream 4668 27010974 ~ 27011055 (+)
trnas-uga_108 NA coding downstream 7326 27013632 ~ 27013713 (+)
trnak-uuu_101 NA coding downstream 8833 27015139 ~ 27015211 (+)
trnas-aga_110 NA coding downstream 9645 27015951 ~ 27016031 (+)
trnay-gua_43 NA non-coding upstream 3846 27000769 ~ 27000855 (+)
trnar-acg_39 NA non-coding upstream 4410 27000219 ~ 27000291 (+)
trnay-gua_42 NA non-coding upstream 6829 26997786 ~ 26997872 (+)
trnae-uuc_31 NA non-coding upstream 7041 26997589 ~ 26997660 (+)
trnar-acg_38 NA non-coding upstream 7397 26997232 ~ 26997304 (+)
G31428 LOC107574244,LOC107838241 non-coding downstream 78011 27084317 ~ 27084707 (+)
G31429 NA non-coding downstream 191581 27197887 ~ 27198266 (+)
G31438 NA non-coding downstream 226790 27233096 ~ 27233432 (+)
G31443 NA non-coding downstream 357282 27363588 ~ 27410595 (+)
LOC122343300 NA non-coding downstream 601481 27607787 ~ 27619661 (+)
G31384 NA other upstream 1191076 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1309320 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1316471 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2237149 24743848 ~ 24767552 (+)
G30882 NA other upstream 2276254 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 291230 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 350506 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 354537 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1200652 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1212427 28218733 ~ 28221417 (+)

Expression


Co-expression Network