LOC122342592


Basic Information

Item Value
gene id LOC122342592
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25916389 ~ 25917199 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250606.1
CTGCGGCTTCATTTATTCAGCCTGCTGCCTCCTCCATGCCAGGTGCATCAGAATCTGTGGCTTTAGATAGTGCTGGTGTGCCAGGCATGGACAGAGTGGACAGCCTGGCGGAGTATCTGGTGGAGCTTAAGAATCAGTCATCGCTGATCCTCACCAACCAGCAGGTGAGCAACATAGTTGCTCTTTGGCAGAACCTGCTGGACTATGATAAGCAGAGGGTGGTGTTTGCTGCCAGACACCAGAGCAAGCTGGACACGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250606.1 True 259 lncRNA 0.54 3 25916389 25917199

Neighbor

gene id symbol gene type direction distance location
trnah-gug_3 NA coding upstream 7005 25909313 ~ 25909384 (+)
trnas-uga_24 NA coding upstream 7811 25908497 ~ 25908578 (+)
trnas-aga_26 NA coding upstream 8157 25908150 ~ 25908232 (+)
trnak-uuu_25 NA coding upstream 8969 25907348 ~ 25907420 (+)
trnas-uga_23 NA coding upstream 9151 25907157 ~ 25907238 (+)
LOC122342357 NA coding downstream 57678 25974877 ~ 25977623 (+)
trnaa-agc_2 NA coding downstream 81624 25998823 ~ 25998895 (+)
trnaa-agc_3 NA coding downstream 91846 26009045 ~ 26009117 (+)
trnaa-agc_4 NA coding downstream 114422 26031621 ~ 26031693 (+)
trnak-uuu_33 NA coding downstream 128477 26045676 ~ 26045748 (+)
G31388 NA non-coding upstream 98825 25817031 ~ 25817564 (+)
G31380 NA non-coding upstream 128488 25787380 ~ 25787901 (+)
G31228 NA non-coding upstream 600836 25315179 ~ 25315553 (+)
G31226 NA non-coding upstream 601793 25314223 ~ 25314596 (+)
G31223 NA non-coding upstream 927115 24988867 ~ 24989274 (+)
trnas-aga_27 NA non-coding downstream 15982 25933181 ~ 25933262 (+)
trnas-uga_25 NA non-coding downstream 18959 25936158 ~ 25936240 (+)
trnak-uuu_26 NA non-coding downstream 20448 25937647 ~ 25937719 (+)
trnas-aga_28 NA non-coding downstream 21253 25938452 ~ 25938533 (+)
trnas-uga_26 NA non-coding downstream 23902 25941101 ~ 25941182 (+)
G31384 NA other upstream 102764 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 221008 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 228159 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1148837 24743848 ~ 24767552 (+)
G30882 NA other upstream 1187942 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1380337 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1439613 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1443644 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2289759 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2301534 28218733 ~ 28221417 (+)

Expression


Co-expression Network