LOC122343193


Basic Information

Item Value
gene id LOC122343193
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22540384 ~ 22541485 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250715.1
ATTGTTGATTGCACCAGTATTTGACAAGCAGCTTTTTGAGACAAACACTGAAGTCAAGCATAAGGACGTTCGTTGTGACAGTGAGACCttcaggcaggcagacagagcCATGATCAGAGCTAGAGTTCCACAGTTCCACAGTCGGGCGACGCTCTCCTCCTCCTACGATGGAAGAAGTCTTACAGCGGCTTACCAAGGTTAGCATCCACCAGAAGCAAATTATGGAGCATCTGGCTACACGCCAAGGGGAGGCAGAGCGCTTCCTGACCCCCGTGTGCAGGCCACCCGGTCACGGCCCAAGATGACTGTACATGACATGACATAGAGGCCTACTTCCAAATGTTTGAGTGCACACTTGAAAACAAAGCCCATGGATTTTGATTGCGTCTCTCGCATAGTCTGACAAAggagtataatttaaaaattgtgcAGTCAACTGATTGTGAAATGGAACTTTATGCTGATTTATCCTACCTCTATCATTCAGCACAAAtccaaatatttcataatgttttcatatttgcaatacaacaataaagcagacttgactatttgaatacattttgtaaattaaaggTACTGTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250715.1 True 586 lncRNA 0.44 3 22540384 22541485

Neighbor

gene id symbol gene type direction distance location
LOC122343018 LOC107705900 coding upstream 94106 22434054 ~ 22446278 (+)
LOC122342312 NA coding upstream 134562 22404053 ~ 22405822 (+)
LOC122343041 zbtb24,LOC107736039 coding upstream 432927 22105236 ~ 22107457 (+)
LOC122343067 NA coding upstream 435452 22103318 ~ 22104932 (+)
LOC122342305 LOC107697548,LOC107574116,LOC107758214 coding upstream 698154 21841181 ~ 21842230 (+)
LOC122343138 si:ch211-133h13.1,LOC107574515,LOC107574820 coding downstream 7132 22548617 ~ 22561763 (+)
LOC122342965 NA coding downstream 71630 22613115 ~ 22621886 (+)
LOC122343101 NA coding downstream 144217 22685702 ~ 22689679 (+)
LOC122342996 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding downstream 154315 22695800 ~ 22706494 (+)
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding downstream 198475 22739960 ~ 22748620 (+)
G30528 LOC107574372,LOC107655767,LOC107710146,LOC107574376,LOC107571418,LOC107574588 non-coding upstream 7352 22532415 ~ 22533032 (+)
G30526 NA non-coding upstream 34192 22505255 ~ 22506192 (+)
LOC122343186 si:rp71-7l19.2,LOC107575109,LOC107690967,LOC107575399,LOC107575457,LOC107575637,LOC107688608,LOC107665206,LOC107671223,LOC107719059 non-coding upstream 120692 22417927 ~ 22419692 (+)
G30480 NA non-coding upstream 195570 22340162 ~ 22344814 (+)
LOC122343188 si:dkey-71l4.4,LOC107667913,LOC107575399,LOC107574515,LOC107698614,LOC107671223,LOC107663329,LOC108183671,LOC107574820 non-coding upstream 228964 22306795 ~ 22311420 (+)
LOC122343169 NA non-coding downstream 1026 22542511 ~ 22543831 (+)
LOC122343204 NA non-coding downstream 8616 22550101 ~ 22551350 (+)
G30598 NA non-coding downstream 262553 22804038 ~ 23246017 (+)
G30599 LOC107561645 non-coding downstream 266503 22807988 ~ 23249868 (+)
G30607 NA non-coding downstream 311996 22853481 ~ 22869703 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other upstream 235236 22296897 ~ 22305148 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other upstream 308460 22231470 ~ 22231924 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other upstream 779203 21368643 ~ 21761181 (+)
LOC122343019 LOC107705900 other downstream 120341 22661826 ~ 22682712 (+)
LOC122342317 NA other downstream 236498 22777983 ~ 22780139 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other downstream 587621 23129106 ~ 23130189 (+)
G30632 NA other downstream 616074 23157559 ~ 23159756 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other downstream 622210 23163695 ~ 23168007 (+)

Expression


Co-expression Network