trnas-uga_1


Basic Information

Item Value
gene id trnas-uga_1
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25827161 ~ 25827242 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_388
gtagtcgtggccgagaggttaaggcgatggacttgaaatccattggtgtctccccgcgcaggttcgaaccctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_388 True 82 tRNA 0.59 1 25827161 25827242

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_1 NA coding upstream 465 25826624 ~ 25826696 (+)
trnas-uga NA coding upstream 1969 25825111 ~ 25825192 (+)
col9a3 col9a3,LOC107713563,LOC107598802,LOC107680173,LOC107719903,LOC107677638,LOC106571930 coding upstream 98510 25711662 ~ 25728651 (+)
ogfr ogfr,LOC107706812,LOC107690085,LOC107713566,LOC107677637,LOC107598801 coding upstream 117524 25703831 ~ 25709637 (+)
lsm14b lsm14b,LOC107748998,LOC107569639 coding upstream 192353 25631361 ~ 25634808 (+)
trnak-uuu_2 NA coding downstream 110 25827352 ~ 25827424 (+)
trnas-aga_2 NA coding downstream 914 25828156 ~ 25828236 (+)
trnas-uga_2 NA coding downstream 1259 25828501 ~ 25828583 (+)
trnas-aga_3 NA coding downstream 3189 25830431 ~ 25830512 (+)
trnas-uga_3 NA coding downstream 3536 25830778 ~ 25830859 (+)
G31388 NA non-coding upstream 9597 25817031 ~ 25817564 (+)
G31380 NA non-coding upstream 39260 25787380 ~ 25787901 (+)
G31228 NA non-coding upstream 511608 25315179 ~ 25315553 (+)
G31226 NA non-coding upstream 512565 25314223 ~ 25314596 (+)
G31223 NA non-coding upstream 837887 24988867 ~ 24989274 (+)
LOC122342592 NA non-coding downstream 89147 25916389 ~ 25917199 (+)
trnas-aga_27 NA non-coding downstream 105939 25933181 ~ 25933262 (+)
trnas-uga_25 NA non-coding downstream 108916 25936158 ~ 25936240 (+)
trnak-uuu_26 NA non-coding downstream 110405 25937647 ~ 25937719 (+)
trnas-aga_28 NA non-coding downstream 111210 25938452 ~ 25938533 (+)
G31384 NA other upstream 13536 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 131780 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 138931 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1059609 24743848 ~ 24767552 (+)
G30882 NA other upstream 1098714 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1470294 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1529570 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1533601 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2379716 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2391491 28218733 ~ 28221417 (+)

Expression


Co-expression Network