trnas-uga_40


Basic Information

Item Value
gene id trnas-uga_40
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26049384 ~ 26049465 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_508
gtagtcgtggccgagaggttaaggcgatggacttgaaatccattggggtctccccgcgcaggttcgaaccctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_508 True 82 tRNA 0.60 1 26049384 26049465

Neighbor

gene id symbol gene type direction distance location
trnas-aga_40 NA coding upstream 261 26049042 ~ 26049123 (+)
trnas-aga_39 NA coding upstream 2826 26046478 ~ 26046558 (+)
trnak-uuu_33 NA coding upstream 3636 26045676 ~ 26045748 (+)
trnaa-agc_4 NA coding upstream 17691 26031621 ~ 26031693 (+)
trnaa-agc_3 NA coding upstream 40267 26009045 ~ 26009117 (+)
trnak-uuu_34 NA coding downstream 1415 26050880 ~ 26050952 (+)
trnas-aga_41 NA coding downstream 2218 26051683 ~ 26051765 (+)
trnas-uga_41 NA coding downstream 2561 26052026 ~ 26052107 (+)
trnak-uuu_35 NA coding downstream 4069 26053534 ~ 26053606 (+)
trnas-aga_42 NA coding downstream 4877 26054342 ~ 26054422 (+)
trnas-uga_30 NA non-coding upstream 97666 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 99879 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 100225 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 102169 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 102513 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 112026 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 118434 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 121054 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 386883 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 394041 26443506 ~ 26443991 (+)
G31384 NA other upstream 235759 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 354003 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 361154 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1281832 24743848 ~ 24767552 (+)
G30882 NA other upstream 1320937 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1248071 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1307347 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1311378 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2157493 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2169268 28218733 ~ 28221417 (+)

Expression


Co-expression Network