tmem8b (tmem8b,si:dkey-84j12.1,LOC107553610)


Basic Information

Item Value
gene id tmem8b
gene name tmem8b,si:dkey-84j12.1,LOC107553610
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 16144894 ~ 16251772 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238291.1
aaaaactgttttttttattgtacggTCACTTTTGGGAAACAAGGATGTATGTCTATAGAACATGAAATCATATTCACATGAGTTCCTGAAAGCTACTCACCGCTGATGAAATGGAACGTATTTTTGTCAGATCAGCTCTTTTCCCTCCCTTATccttaaaaaagcattttgtagTTAAACTGAGTCAGAATGTACAATCTTTTCCTTAGGATGCACCTGTTTTGGTTTCCCGCTACATCTCAGGTTTAGTTTACTGCCCTTTTGACAAAACCACAGAACTTAAGAAGTCTAAAACATCCTGCTTCAAACACATGCCATTACAGATCAGAGGTTACATTAACATATTAGACAGTGTAATGCCTGTTAAACGTCGTTTTGACTGAACTAAGAATAAAACGTTGGTGCTAGTTCTTAATTAGCACATTTTGATTGCCAGTTCTCTTTGAGAATTGACTTGAAATGAAGTAGATTGGTAGGGAACGGAAGTCTAAAGTATGTTGCACAAATGTGACATTGACttgacattgacatttttttctaattgaatctcttttaaaaaaaataaaacgtacattttaaaaatgctttaaaactcAGCAAGGATTAATTTATATGTTACAAATAAACagtaactgttttctattcaatatattattaaatgtaattttcagcaAGCATTACTTCACTCTTCACTGTCACATGATCAacagttgtgttgctttttttgtaaacattgaTGCatctttcaggattctttgacaaataaaaatctcaaGTGAACAGCATTTAACGTTAAGTCTTTGTTGtcgcatttcattttatatatgtattgaaaatgttttactgtttcttaTGAGTCATCAACTTATAAGTCTGAGCGATAGAGGGCAAGACTGAAAAACCACAAGTGCTGAGTAAGCATGGGACTAATGTGGGTGGTCCTCCACAAACCCAgtcaaacaacacacacacacacacactcagagttTCCCCACTGACCTCTATTGCAGGGCTGAATTCATGCAGGTCTGACAGCAGTAACTGTGAACACGTGAGCTTCAGGCAGCTGTAGGGGGGCCAGCTGGCCAAAGTGAAACCGCATGATGGATCCTCAGACCTACAGAGAGGCATCTGGGAACTATTAAGACAGTAATGGTGTTTAATGAACAGaacattattcattaataaatgcatcacaTGCATTCTcaacaaatacataattattaattataaaaacacaccgCATGCAACACAGCGGGAAATATAGCTGACAAAGTACATAGTCTGGAACATGTGATGACATCCCATACTGGTTTAAGGGAAATTCAGCGGCTCTCCTGACACGATTTACCTGTTTATCACAATATGTTCATCATATTTTCCTTATATTAATCTGATTATTTAGTCAACTATTGCTTGTCTTCGGagtttacattttacagcaGATCATACGGTGTCATTCTTTGTTTtgctcaaatatttttcaaatacgAGTCAGCCCCGGTATAAAGTTTTAaacttgttcatttaaattgttgCTAGCCTATTTTTTGAACATATGTAACCCTGAaccaaaagaacaaacaaacaaaaacattaatctaAAAGCTGAATAGGCTTTCCtttgatgcatggtttgttaggatagtaCAATATTTAAGAGGCActaaaaaaatctggaatctaagggtgcaaaacgttcttagcaatgcatattattaaaaataagttttaatacatttacggtaggtaggaaatgtacaaaaaatgatttttggcttaaatttgaaaaaagatATAATTTTGACAGATACAATGTATCGTCGGCTATTTCTACATCTATGTCTTTTCTACTTATTCCTATCTGCTACAGGGGAACATATGATGAATATTCTGTGGTTATTATAATACACTACCAgaatagataaaaaaatgtctgcaaatgttttacttttttacttcaGACCATCATTAAAGAGAATGGAATACAATCCAAAGTAGAACACGATGgaatagaaaacaaaagtgATGGAGTACGAGAGACATCTAGCGGTCAAACGAGTGTTTGAGCTTCTGTTGAACTTACTAGCATCGTTTGGTCTGTAATAAACAGTCTTTCTAAAGAAAGCAGGTAGATGAACTTCAGTTCAGAGCTGGCTCTAGAAGTCTACCGAAGTGTTCGTCTCTACGTGCCTGTCCGCTCAGGATAAGCTTAGACATGCTTAAAACAGCACCCAATGTACCCAAACATCAGATGAATAGTGTTTTTCCcctaaaaaaattactttatgtTGATAACGTTTAAACGCCACTGCGACCCAAATAAATCACTGAAAAATACGCCACCAAACTAACATCTAGTCAGACAAACGCTTGTGAAACTGCAACTGTACGATGATCCAGAGTAAAGAAAGTTAAGAAGTCATTGGTGCATGGTTGCTGGTCAACCAGCTGGAAACGGCTAAGAACCAACGTTTATTacgtaaataaaattatgtaaataatattaccGCGCTGTAAAAGCGCTTACAGGTAAACCAGCGCATTTAGTTCTTCAGTCGGCATTATATTCGTGGATAAAAATTCTCAGTTCCCTCATCGAGATGTCAGTCAGCGGCCAATAGATGGCAGTATTGGCCTCTCTTAGACAGAGTGACAGGGTCTACGAAATCAAATGAATATGATCTCAAATCTAACCATGTTCATTTCCAGAGAATAGTATTATTTTACCTTcaagtaatacaaataaataactctAAAGTGGCAATTTAAGAGTTAAAAGGAATCATTAAATCATTACTTTCCTCGTCACCAAGCAGCTGTGtattaaatttcaataaaaaaaataaataaaaataaattgggAATGCATGCAACACCATCGAACTTGGTTCTTGAGGAAGTAAACTTGAAATGCTGCTCATTTGTCCGACAAACCACTCATGTCTCCTACCAGGACAGAGAGAGACGCCAGTGCCTTTGACTGACATTCTCATCTGCCAATCAATTGAATGGATGTGTGGCGAACTTCCAATCACAGCAGAGAAGGGGCGGGGCTTTCTCGGAATAGCCTCTTCGCTATTACGTCATGCGCGAACAGCTGGTCCGTTGCAAGAGCTGAAAATGTGGACAAGCGTAGCGATATAAAAATCGCGTCCGTGCCGTCGGGGCGTAAACAGTCAGTTTATCACGATGTGGTGGCTGGAAGGGTTTAGGTCGGGGATGGGCCGCCTGGAGATCCTGTTGCTTGTTTACACCTTGCTCTGCTCTCTCGGAGATTGCCTGTTTGTAACTGACTATTTCACCCGGACGCCTCGCAAGCTCAACGCCTACCGCTCTTTTGCCAGCGTGGAGCTGTTCCACTTCAACGTGCCTGAAGACACCGTGGTGGCTGTTTGGAACCTCATCACCTTCAAGGAGCAAGGGGGCACCTTCGGAGACAGCTGCCCAGACCGCAATGTGACAGTGTACTTCAGGTCGGGAGCTCCACCTGTAATCAACCCCCTCCAGACACGTTTTCCAAAGGACACCATTGTACCAGGCTCCTTCGCTGTCACTTTGACATGGACGCTGCCCAACCGCACCACAGGGGTTTTCAATGTCACCAGCCCCCTCCCAGGAGACTGGTTCCTGGCTGCACACTTACCAAAGGATGAGGGGAAGATCTCTGTCAAGGGTCTTCACGAGGAATGTCAGTACCTCTTTCAACCTCAGCTCATTGTTCAGAGGCTCATTGGGATTTCGGTGCTGTATCCTGGTTACTTCATTGACCAGATGATTCCTCTTCACAATAGATCGGTACTCTACAAAGTGTTCCTCCCAAACTACATCTCTCGAGTGAAGGTACAGCTTGTGGACTGCAATACAAAGAACAAAAGGGAAAGCTGTCCGGTTTTGCTGAAGATCCGTTCAAGGGCCCCACCTGTGCATAACTCCAGCGCTGTGGACTGCAGAGAGAACATTCCCTGTGAGCTGGAGGTCCCGCTGCCATCCTGGGAGCAGTGGTACTATATTTTGGTGGAGCGTTACCTCAGTAGCTCAGACGTCTACTTTCGTATTGGCATTCAGGTTAAAGACTGTTCCAAGCCCAGTGTCTCCAAGGGCTCTTCAGCCATGAACATGCCCCAGTCATTTGGCACTGCGATGGGTTTTTCTCTATCGGAGACCCTGCCTGCTGCCAGCCTGCCTAACGTGCCCCAGAATGCTTCAGATCAGGGATCTCTGTTAACTGCTGAAGACAGCATCACTTATTTAGCACCCACGGCAGACACAAATAAATGCTGGCCTATCCGGCCAACGCTACGGAATGAACTGGACACCTTCTCGGTTCATTTCTACATCTTCTTTGGGCCCAACATCTCCATCCCCCCAGACCGGGCAGCGATATTTGCCATCAACCTAATGCCGGTGCTGGACAGCGGAGGCGTCCTCAACATGGAGCTCAAACTCAATGTGtcttcagtgagaGGAGAGAATATTACGATCTTTGGCTGCCTGAATCATGGGATGCCACTCTCCCTTCACGACAACACATCAGTCTCGTGTGAATCTGAATCAGTTTCAGGATTTCATCTCTCCATCAACACCACTGCAAATATCACCAAGCTGAGGATTCCCTACCCGCAAACGGGCACGTGGTACCTGAGCCTGCGATCCATGTGTGCCACAGAACACGGGTTCGAGATGTGTACTAATGTAACAGCTGAGGTGTACCTTCTCTCTTACCTGACCCCCTGCATCAATGACTGTGGCACCTATGGCCAGTGCAAACTCCTGCGGACCAACAACTACCTGTATGCTGCGTGCGAGTGTAAAGCAGGTTGGGATGGCTGGGGTTGCACGGACAACACAGAGGCGTACTCATACGGCTTCCAGCTGCTCTCAACTCTCCTTCTGTGCCTCAGCAACCTGATGTTCGTCCCACCTGTGACCATCGCCATCCGCAGTCATTACCTGCTGGAGGCATCTGTCTATATTTTCACCATGTTTTTTCCACTGTGATTTTATCATGCCTGTGACCAGCCAGGCATTGTGGTCTTCTGCATCATGGAGTATGACGTGCTGCAGTTCTGTGACTTCCTCGGCTCGCTCATGTCTGTATGGGTCACTGTTATCGCCATGGCCAGACTCAAATCCATTATCAAACAGGTGCTGTACTTGCTGGGGGCGATGGCTCTGTCAATGGCCTTACAGCTGGACCGCCATGGCCTGTGGAACCTGCTGGGTCCCAGTCTTTTCGCTTTAGGCATCATGGCCATCGCCTGGACGGTGCGCACCATCCGCCGGCGCCGCTGTTACCCGCCGACCTGGAAGCGCTGGGTCTTTTTCCTGTTTCCCGGCACCACCATTGCCACATCAGCGGTGGCCTTATACGCATACGTGGAGACGGAGGAGAACTACTTCTACATCCACAGCATCTGGCACATGCTCATCGCCGGGAGCGTCGGCTTCCTTCTGCCGCCGCGTGCCAAACCTGACGTGAAAGTCACTCCCCTGAAGCGGCGGCGAGGCTGCGGCTACCAGCTCTGTGTGAACGAGCACGAGGAGATGGGACTGGTGGACCCAGCGATCATTACCATCAACAGCATATGCACCAGCTGATGACGCTTAGCAACGCGGACTTTTATTTGCCTTTCTTCTCCTTCCTTTGGATTATAAAAACACGGAAAACAAAGCCAGAGAACTTACTGATGCACTGTAAATAACTTTTGAccgaaacacacacagacatacacacgcTCTTGCATACGCGTACACGTTTTTGTCATCGTTATTTGGATTACTATTATCGTTAATAATATGGTTTGCATTGTTAGTATCTGGGAATGGTTTGTGTCAGTACAGCGATGCACTGTTATTAGTGCATTATTTAAACCGTCTGAGATGATTTTTCTGCTGCTATTGACAGTGactgtaaaattgaaaaatgtgtcatgtaatttattcattgttttctgGCACTCAAATgaccaaatgttttattgtgtttagaGGATGCAAAGGAAGAACACTACTTGGATGTATCAAGGGCActgctttttttagttttctttctaaACATCTTTTGCACTGAGACACAACAAATGtgatactgtacattttttaaatataagtatagtTATGATCCAGTCACAATGTGTACATGTATAGTATAGTTGTTTTCAGTGGAATGTCTGATTGTACTTTGGATTGCATTGTATTGCCTTTGCAGCATAATTGATTGTCGATTTATAGAGGGTTTAGGAAAGTGTCCATTGCCAAGACCAGGTTTTAATATGAAACCTCAGATAAATAACCTCATATTTCCTGTTGTATTTACCTAGTGAGGATCAGAGGgagacattttaaagcaaaagcaaatgataaagcaaataaatgttttattttttcggTATCAAATCAGATTCTTTATTTAGCTGGTAATGTGTTACTTGAAAGTGACACACCAGACTTCTGTCATGCTCTGATATTTTCAAAGAAATGAGAAAGCGCAAACAAGGGTCTCTGGGATTCAAAacccattttttaaataaatcattttctcCTGGCTTCGTATCATGACATCATCCTCTATGTTTCATTTCTTATGAGGATGTGTGTCCTTAAGTTCCTGGCTTATGTGCTTTCATAACACACATCGGTTTTAAACAACATGGAGCTTAAGGACAGGGGTTTTTTCAGACGGTAGTACAATATTTTCTTCTGTCATATCAGCCTTTGACTGGGGATGAATCACGTGTCGTGCTACttgttaatgaataattatcATCGTTctccaaaatgaatatttgttcAGTAACCCCACTTTAAATTGAAAGATTGATTCTATCGGAAATTAAATCATTGTTATTACTGTcctaatatgtgaccctgaaccacgaAAACTGTCATAAGtgttaatttttcaaaattgatatGTACATatcatctaaaagctgaataaataagcttttcgcTGATGTATCGTTTATCATAATTGaccaagatacaactatttgaaaaagtagaatctgagggtgcaaaaaaaaaatctaaatagacAATCACGCTTCAGTTTTTCCAAATGAAGttcaatgcatattaaaaatcagaaattgatttggctattgctacaaatataccccagtgacttaagactggttttgtggttcagggtcacatgtaTGCAAAgttaatgtaaagaaaaaaaaaacatttatgcccAGTCATGACATCTGTTTGCTCAGAAACAAACTGCTCAATTTTTCTGTGTACTTTAAATTGCTTTTGCATTAATAATCCATAAA

Function

symbol description
si:dkey-84j12.1 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human TMEM8B (transmembrane protein 8B).
tmem8b Involved in cell-matrix adhesion. Located in cell surface and plasma membrane.

NR:

description
PREDICTED: vascular endothelial growth factor receptor 3-like

GO: NA

KEGG:

id description
K24576 TMEM8A_B; transmembrane protein 8A/B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238291.1 True 7286 mRNA 0.42 16 16144894 16251772

Neighbor

gene id symbol gene type direction distance location
LOC122345915 hspb11,zgc:158640,LOC107746844,LOC107681463,LOC107719933,LOC107660270 coding upstream 55981 16087941 ~ 16088913 (+)
nos2a nos2a,LOC107553584,LOC107719931 coding upstream 61139 16076241 ~ 16083755 (+)
si:dkey-40c11.2 LOC107680639,LOC107552538,LOC107746841 coding upstream 130479 15985786 ~ 16014415 (+)
rhobtb4 rhobtb2a,LOC107552568,LOC107680668,LOC107746840,LOC107676653,LOC107718339,LOC107553600 coding upstream 166146 15951062 ~ 15978748 (+)
wdr54 wdr54,LOC107746838,LOC107552569,LOC107718338,LOC107676672,LOC107680694 coding upstream 217525 15921758 ~ 15927369 (+)
LOC122345865 si:dkey-114c15.7,LOC107597238,LOC107672487,LOC107733230,LOC107592265,LOC107748635 coding downstream 127583 16379355 ~ 16389644 (+)
LOC122345769 zmat4a,zmat4,LOC107594996,LOC107587306 coding downstream 148660 16400432 ~ 16409920 (+)
LOC122346216 fam101a,LOC107687957,LOC107553832,LOC107684501,LOC107576363 coding downstream 292063 16543835 ~ 16554564 (+)
edil3a edil3a,edil3,LOC107685241,LOC107669516 coding downstream 784023 17035795 ~ 17162890 (+)
LOC122344732 LOC107570126,LOC107742021,LOC107694705,LOC107675326,LOC107715436,LOC107574130 coding downstream 977622 17229394 ~ 17253899 (+)
G37155 NA non-coding upstream 47889 16095985 ~ 16097005 (+)
G37123 NA non-coding upstream 90886 16053032 ~ 16054008 (+)
G37047 NA non-coding upstream 225609 15918506 ~ 15919285 (+)
G37038 NA non-coding upstream 284791 15859759 ~ 15860103 (+)
G36993 NA non-coding upstream 321143 15821892 ~ 15823751 (+)
G37260 NA non-coding downstream 408749 16660521 ~ 16660743 (+)
G37286 NA non-coding downstream 536058 16787830 ~ 16812417 (+)
G37291 NA non-coding downstream 575353 16827125 ~ 16827476 (+)
G37308 NA non-coding downstream 637425 16889197 ~ 16889977 (+)
G37330 NA non-coding downstream 1098819 17350591 ~ 17350922 (+)
G36640 NA other upstream 1424407 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 1491983 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 1794903 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 1807129 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 1839590 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 140025 16391797 ~ 16395562 (+)
G37227 NA other downstream 222936 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 234848 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 1113077 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 1274252 17526024 ~ 17527444 (+)

Expression


Co-expression Network