G25076


Basic Information

Item Value
gene id G25076
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1140627 ~ 1160430 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU28296
ACATTTAAGGGATACTGTACAGTCACACCACTTCTTTAAATGCCATTTCGCCACATAAATAATTATGGAGATAAGAGATATTGATCTGGGATGAAACTGTTTTAAAATCGTTCCTGTTTGTTATCTTATAATCCAGCATTGTACAAAACAATAGTCGCAAAATGGCAGCAGCTGCATTTATATGAAACGAGAGTGCTACTGGATACTGGACGACATAATTAAATAACTGTATACAAAATATTGATTTGACTGAGATTTAATATTTTATTAGCTCACCAAACGCAAAACTTTGACGAAGAAAAAACGTTCCTAGTAAGTGTATAGCACTGCTGACTTCAGTAACCCGGATGAGCCTGTGTTATCTGTTTTCAGCGGTTGTTATCGGGGAATAACATACCGCTGGATGGCGCGATTGACCAATCAGAATCAAGTATTCCACAGAGCCTTGTAATAATAGAGCATAAAGCATTCCTATTGAACAGAGTTTACAAAGAGTGACTGTTTTGTCCTCGTTTTGTTTTTTTATCTTCGCTGTTGTAACATTTGGAAGACAAAATGTGTATCCATCGACAGAAACATACATTAGCCGAACTCTGTCTGTTATACATATTTTTATTTTCAACAAACCATATTATAGATGCGTTGTCAGATTTAAGATTTACCGTGGTGCAAGTGTGTGCTGAACTGTGGGTGGAGAACGGTACGGTTCAATTTTTAGAGAACCGTTACACTCCTACTTACTTACATTTAAAGTACACATAAGATAGAATTAATATCGGTTCTTCAAAATGAGAATCAATTAAATCGAGAAACCTTTTTTAATTTTTTTTTTATACCCAGCCCTACTACCAACACAACATCATTTCATATATTCTGCACAATGAAACAGGACACAAATTGGATCTGAACAGTTCCCTTTATGCACTCACATCTCAGTGGTGATTCGCTGATGGAAGAGAAATTCTCTTTGTTTTTTCATTTTTT

Function

NR:

description
PREDICTED: microfibrillar-associated protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28296 True 984 lncRNA 0.43 2 1140627 1160430

Neighbor

gene id symbol gene type direction distance location
CI01000004_01094661_01097428 NA coding upstream 42969 1094661 ~ 1097658 (+)
CI01000004_01069526_01076799 RGS18 coding upstream 63599 1069526 ~ 1077028 (+)
CI01000004_01002230_01003932 NA coding upstream 136645 1002018 ~ 1003982 (+)
CI01000004_00711100_00720189 NA coding upstream 419911 711100 ~ 720716 (+)
CI01000004_00664431_00666004 NA coding upstream 473276 664431 ~ 667351 (+)
CI01000004_01167271_01194834 NA coding downstream 5509 1165939 ~ 1195104 (+)
CI01000004_01210703_01220270 PPM1L, PPM1LA, PPM1L.L coding downstream 50024 1210454 ~ 1220283 (+)
CI01000004_01228506_01230204 ARL14 coding downstream 67975 1228405 ~ 1230414 (+)
CI01000004_01237895_01247463 NA coding downstream 75938 1235162 ~ 1247463 (+)
CI01000004_01263941_01279547 NA coding downstream 103511 1263941 ~ 1279758 (+)
G25089 NA non-coding upstream 8050 1132293 ~ 1132577 (+)
G25044 NA non-coding upstream 33703 1106696 ~ 1106924 (+)
G24526 NA non-coding upstream 59093 1080811 ~ 1081534 (+)
G24641 NA non-coding upstream 76475 1063697 ~ 1064152 (+)
G24640 NA non-coding upstream 83503 1056544 ~ 1057124 (+)
G25129 NA non-coding downstream 129792 1290222 ~ 1290678 (+)
G25143 NA non-coding downstream 150613 1311043 ~ 1311591 (+)
G25222 NA non-coding downstream 284635 1445065 ~ 1445396 (+)
CI01000004_01446583_01461259 NA non-coding downstream 298903 1446203 ~ 1465922 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 668781 467802 ~ 471846 (+)
CI01000004_01332533_01345585 SCP2 other downstream 172035 1331583 ~ 1346008 (+)
G25187 NA other downstream 444112 1604542 ~ 1616470 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 703729 1867166 ~ 1868986 (+)
G25329 NA other downstream 922627 2083057 ~ 2085707 (+)
G25882 NA other downstream 1387645 2548075 ~ 2573049 (+)

Expression


Co-expression Network