G25242


Basic Information

Item Value
gene id G25242
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 1704257 ~ 1704558 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU28472
CCATTATTACCAAAGTTTTGCACAGGTTTTGCAAGTAGCAATCTAAAAATCTACTTAGATAAATACATATGAAATATATTTCCTGACATAGTGTTGTTAATAGTAGTACTTGCTTGAAAGAACAAAAAATAGACAAGAGGGCGAGGTCTCTGAGTTATTAGAGTACACGAGGAAGACGCTTGGGACGTGCTATTTAGGGTACATTCAATTTTTACCAAAAATCCCGTGACACTTGGGTTAACTTTTTCCATTGCTGCCATGTCAGTAGCTATGAAAGCTTGGGAATTTTTTGGGGAGCGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28472 True 302 lncRNA 0.37 1 1704257 1704558

Neighbor

gene id symbol gene type direction distance location
CI01000004_01670419_01699238 PDE4BB, PDE4B coding upstream 5019 1670419 ~ 1699238 (+)
CI01000004_01623427_01625278 LEPROT coding upstream 78917 1623427 ~ 1625340 (+)
CI01000004_01592461_01602968 NA coding upstream 101289 1592356 ~ 1602968 (+)
CI01000004_01578642_01584658 NA coding upstream 119449 1578566 ~ 1584808 (+)
CI01000004_01501609_01545725 NA coding upstream 158138 1501609 ~ 1546119 (+)
CI01000004_01715623_01744133 SGIP1B, SGIP1 coding downstream 11065 1715623 ~ 1744133 (+)
CI01000004_01750322_01754593 TCTEX1D1 coding downstream 45764 1750322 ~ 1755323 (+)
CI01000004_01757017_01757201 NA coding downstream 52459 1756990 ~ 1757864 (+)
CI01000004_01800502_01807872 NA coding downstream 95944 1800502 ~ 1808852 (+)
CI01000004_01823571_01825813 FAM78BA, FAM78BB, FAM78B coding downstream 119013 1823571 ~ 1826766 (+)
G25192 NA non-coding upstream 118637 1585266 ~ 1585620 (+)
G25226 NA non-coding upstream 133379 1570619 ~ 1570878 (+)
CI01000004_01446583_01461259 NA non-coding upstream 214380 1446203 ~ 1465922 (+)
G25222 NA non-coding upstream 258861 1445065 ~ 1445396 (+)
G25143 NA non-coding upstream 392666 1311043 ~ 1311591 (+)
G25248 NA non-coding downstream 55972 1760530 ~ 1762263 (+)
G25253 NA non-coding downstream 65267 1769825 ~ 1770177 (+)
G25254 NA non-coding downstream 65837 1770395 ~ 1770704 (+)
G25337 NA non-coding downstream 241368 1945926 ~ 1950133 (+)
G25187 NA other upstream 87787 1604542 ~ 1616470 (+)
CI01000004_01332533_01345585 SCP2 other upstream 356083 1331583 ~ 1346008 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 1232411 467802 ~ 471846 (+)
CI01000004_01867166_01868986 C7H1ORF21 other downstream 159601 1867166 ~ 1868986 (+)
G25329 NA other downstream 378499 2083057 ~ 2085707 (+)
G25882 NA other downstream 843517 2548075 ~ 2573049 (+)
G25992 NA other downstream 1031978 2736536 ~ 2736768 (+)
CI01000004_02745885_02768971 NA other downstream 1053898 2745885 ~ 2769135 (+)

Expression


Co-expression Network