Gene
RNA
| Item | Value |
|---|---|
| gene id | G25254 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 1770395 ~ 1770704 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU28484 | True | 310 | lncRNA | 0.36 | 1 | 1770395 | 1770704 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_01757017_01757201 | NA | coding | upstream | 12531 | 1756990 ~ 1757864 (+) |
| CI01000004_01750322_01754593 | TCTEX1D1 | coding | upstream | 15072 | 1750322 ~ 1755323 (+) |
| CI01000004_01715623_01744133 | SGIP1B, SGIP1 | coding | upstream | 26262 | 1715623 ~ 1744133 (+) |
| CI01000004_01670419_01699238 | PDE4BB, PDE4B | coding | upstream | 71157 | 1670419 ~ 1699238 (+) |
| CI01000004_01623427_01625278 | LEPROT | coding | upstream | 145055 | 1623427 ~ 1625340 (+) |
| CI01000004_01800502_01807872 | NA | coding | downstream | 29798 | 1800502 ~ 1808852 (+) |
| CI01000004_01823571_01825813 | FAM78BA, FAM78BB, FAM78B | coding | downstream | 52867 | 1823571 ~ 1826766 (+) |
| CI01000004_01855598_01856473 | IMP3.L, IMP3 | coding | downstream | 84647 | 1855351 ~ 1856524 (+) |
| CI01000004_01867166_01868986 | C7H1ORF21 | coding | downstream | 96462 | 1867166 ~ 1868986 (+) |
| CI01000004_01883020_01908403 | ABI1B, ABI1 | coding | downstream | 112316 | 1883020 ~ 1908634 (+) |
| G25253 | NA | non-coding | upstream | 218 | 1769825 ~ 1770177 (+) |
| G25248 | NA | non-coding | upstream | 8132 | 1760530 ~ 1762263 (+) |
| G25242 | NA | non-coding | upstream | 65837 | 1704257 ~ 1704558 (+) |
| G25192 | NA | non-coding | upstream | 184775 | 1585266 ~ 1585620 (+) |
| G25337 | NA | non-coding | downstream | 175222 | 1945926 ~ 1950133 (+) |
| G25344 | NA | non-coding | downstream | 184681 | 1955385 ~ 1955605 (+) |
| G25345 | NA | non-coding | downstream | 185438 | 1956142 ~ 1956492 (+) |
| G25324 | NA | non-coding | downstream | 185938 | 1956642 ~ 1957261 (+) |
| CI01000004_01961480_01979407 | DVL3A | non-coding | downstream | 187949 | 1960055 ~ 1979465 (+) |
| G25187 | NA | other | upstream | 153925 | 1604542 ~ 1616470 (+) |
| CI01000004_01332533_01345585 | SCP2 | other | upstream | 422221 | 1331583 ~ 1346008 (+) |
| CI01000004_00467911_00469949 | AGRP2 | other | upstream | 1298549 | 467802 ~ 471846 (+) |
| G25329 | NA | other | downstream | 312353 | 2083057 ~ 2085707 (+) |
| G25882 | NA | other | downstream | 777371 | 2548075 ~ 2573049 (+) |
| G25992 | NA | other | downstream | 965832 | 2736536 ~ 2736768 (+) |
| CI01000004_02745885_02768971 | NA | other | downstream | 987752 | 2745885 ~ 2769135 (+) |
