G25332


Basic Information

Item Value
gene id G25332
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 2074919 ~ 2081442 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU28567
GACAATGACAGCTCATCTGACTTCTGTTCTTTTTAATGGAGCAGGCAGTTAAAATGCAAGTTCTGATATTTCCTTTATACATATTTTGTTTAACATGTTACAATAAGGTCTCATTTTAGTTAAAATTAGTTAATGCATTAACTAACACGAACTAAAAATGAGTATATTCTTACAGAATTTATGAACTTTTGTTGATGTTAGTTAATAAAAATGTTCATGTAAGTTCACAACATTAACTTATTAAATACAGCTTTGGATCTTAGTAATTAGTAAATTTTGAGATTAACATTAACAAAGAATAACAAATGCTGTATTTTCATTGTTAGTTCATGTTAACTAATGTAGCTAATGTTAACAAATTGTAAAGTGTTACCCATATTTCCTTGAAAGTGTTTTAACCAAAAATTCAACATTAAGTTGAACTGAAATTAATAGAAACGAGTATTTACAGGTCTGAATAAATATTAAAAAGTATTTAAATATACATAGATTGTTACTCAGGAATACAAGTGAATTTATATTTATTTAATAAAAAGGCAAATGATATTGAAAACAACTATGAAAAAGCATGTAAAAACAGAAACACAAACAACAACCTATTATAATGACAAATGATTCTTGCCCTCTACATTTAGCTATTTGGAATATTTAGCTAACAATATTTAGCATATTATGCAATTGTCAAAGTCCCCATATATAATCAATGAAATACAAGCACTTTTTACCTTGGATTTGACAGCTGATGTATTGGGCTCTGTGTAGAAGCATATAGATAAAGAGTGAAAAGTAAACAGGTGAAGGTGACCAATAAGTTATCAGCATTCCACCCTTGACACATTACCTCATGCACATACAACAATTCACTATACAAACATCTGCGAAATCAAAAATAACAATCTGTCGCTATTAATAAATCTATAGCTCATTTTTAGTAAATCATTCATTAGTAGAATATATTTTGAATATTTCACATTCACTGTATTTACTACATTCCTACAGAACAGAAATAGTAGAACACTACTATAAGAAATATAAACATATAGGCTATATAATGAAAAACGATCTATATAACCTCATCACATGGCCACAATGATACAAAATCTACCATGATCATTACATTCCAAAGTCCAATACAATGTAAAGTAGATTTTTATTGGTGAGAATGATGGCAAACTTACTTGGTTACTGGAAACATTAAAGATTTACTATTGCTGTTAATACTCTGCGTCATATTCTGTATTTTACAAGACACGATTTATTATTTTACAAGGATGCATTAAAATGATCAAAAATGACAGTAAAGACATTTATAATGTTGCAAAAGATTTCTATTTCAAGTATATAGTTCTGTCATGAAACTCTAGATGGCACAGGCTGATAGGTCCTTAACTCAATCTGTTTGCAATCACATCATTCTCTATAGGGCACAGCTGATTGGTTCCTGCTGTATCAGTAGCCAATCTTCAAATACTTGGTCAGCATTTGCTGAAGCAGTTGCAGCATGCTTAAAACCCTCCACCTTCCCCAGCTCCACCTGTATAGATCTGCAGGGGGTAATTCATGTACGCTCTATTGTACAGCAGCAGCATGTCTTGCTCACAGCAGCGTGTCGTGTATGTATTGGCAGTAGCACGTCCGGTGCAGCAGCAATAACCAACAGCAGCAGCAATAACAGCAGCAGCAGCGTAGCAGATCTATTCCGCCAAGACCAAACATATCAACATGGTCATATCCATTACAATGCCAAACACTCTGAGAGTTGTCATGACAGAAATGTTGTAGTTTTGAACTTTGTATTAATCAAAGAATCCTTGAAAAAATGTACACAAAAATAATAAAAAATTATTTTAAGTTGTAACTATTTCACAACAAATAATTCATTTTTGTTCAAATAAATGCAGCCTTGGTGAGCATAAGAGACTTCTTTCAAAAACATTAAAAACTCTTACCAGACATTTCTTATGCTCATTTGCTCATGTAAATTCAACAGTCTGTCTTTTTTCCAGATCGTGTTTTTTAACGTTTTTAATGAATGTGGCATAGCTTACACCCTTTATATCCATATAGAAACTTAAAATTCTGTCATTCCAGTCCTCAAATTTGACTGGCTATGTGGCAGTGCTGAGCGAAAGCGGAGCACAGTTGCCTGGAGCCAGGAGCTGTTTTACTGAAAGTCAGAGTATCAGTGTTTTTCAGTGGGAAATGGGCAATCTCACTCCGCTCCACTCGTATACGTTGTTCCAGTCCGGCTTTCAGTCTTTGTGTTGCTTGGTGACAACCAAAACTTGATGCTTTGGCTTCTTTTGGAACTATTTTCATTGGCGGAGAAGAAATATACGCACTAACTGACCAATTTCTTTAAAAGTTATATTTTTGGGCTTCTATTAGACAGGACAGTAGGAGGAAAGACAGGAAACATTAAGAGAGGAAGAGGACCACGAGCCAAGACTTGAACTCAGGTCACTTGAGACTCAGCGGCACCATATGAAGCCTTCCCAGAAAACTACGGCACTGACTTTGTTAACAATTTCTTGTGAAAAATGTAAGTTGCTCAGTATAAATTACTTTTTTAACATTTGTATTTTTAAAAAAAGGCTTTAAAGAGACATGCACACTGAAAAAAACTTTCCAAATGTCAGTTAAGGTATACAGAGCAAAAGTAAGGCGATAGGGAAAAATCTAGTAGTTCAAAAATTTTGGGCCAGAAAGTTTTTTTTTTTTTTTTCATATTTTTATTCAGCAAGGATGCATTAAATTGATCAAAAGTCACATTAAAGGAATATTACAAAAGATTTCTATTTCAAGTAAATTCTGTTCTTTTGAACTTTCTATCCTGAAATCCTGAAAAAAATGCATCATGGTTTCCACAGAAATATTAAGCAGCACAACTGTTTTCAGCACTGATTATGTAACCCCTCACCCAGGTCCTACTCACTCCGCTCTGCACGGGTCTTGAACCTGGGTCTCTGGCATGGGAGTCAGAAGCTCTAACAAGGAGGCTGCAACCTCTAGTGTCAGTCACTCGCAACTACTAGCTGGCGTCCATTAAAATCATAATAATAAATGTTTCTTTAGCAGAAAATCAGCATATTAGAATGATTTTTGAAGGATCATGTGAGACTGAAGACTGGAGTAATGATGCTGAAAATTCAACTTTGACATTACAGGAATAAATTACACTATTAAAATAGAAAACAGTTGTTTTAAATTGTAATAACATTTCACAATATTACTGTTTTTACTGTATTTTTGATCAAAATATATGCAGCCTTGTTGAACATAAGACGTCTTCTTTCAAAAACTAAAAATCTAGCCCCAAACTTTTAAACGGTATAGTGTACATGACTTTTCATGTCATTAGGTTATAATCAACATAAGATTTTGCTTGCAGTGCAACTGATATAGCATTTGGTTAAATTAACTTGAACAGATTACCCTGTATTTTCTAGAGAGTGTTTGGCAGCCCACGAGGGTTGAATTTTACAGAAAATGAGACAGAATTGGAGGCAGAAAAAGAGGCAGAAACAACACTACGTAATGTGACCTTACTTATTGAGAGCTGACGATGGTCTTTTTGACACACCACCTCACGGAACATTTCTCTGAAGCGTGAAGACATGATGTTATACAGGATGGGATTGACCACTGAGCTCAAGTAGAAGAAGACACCAGAAACAAGATGCACATACTCAAAGACATGGTGTTTCTCTGCAGTCCAGTCTTCAATATAGCTCCACATGACACGATCAATGTGAAAGGGGGCCCAGCAGATTCCAAACACAATCACCAATGCACCTGTGAAATATTAAAAAAGAGAAAGTATTAAGTATAATGCTTTATTATTATATTTTAAACATTCCATATTATATTAAATTATATTATATTACATATTGAGCAGAACTGACTTCATACATACACTAAAAAAAAATCACCAAAACACCAGTTAATAGTCATTTCAAAAATGACTACGGAAAATGACGTTCATTCTGAAAAAAGCTCTAGCATCATTTGTTTGCACAATATTGTAATCTGACATTCGTACATTTTAAGTGTGGTGTAAGTGTCCAGCTACACTTAGAATGTGTTTAAATCTATAAGACAAACTGTTACTCTTGGCACGCATCTGTGCTACTGACAGTATTTAATGTTCATGACTAGATCTGAAGTATTTTGTTTGTATCTAAGTATCAAAGTATATGTTGAAAGTTTTTGAGGATGACCACACAGCTATTACAATAAGCCAGATGTAGACTGACGCTATTACTAAATCAGATCCCCTTTGTATTTACAATAACATGACAAGAGGCTGATAAAGCACAGATGAGTATTTTCTGTTTATCAGGAAAGATTATTCTCAACAAAGGTCCATGAGCTTTCTTCAACTGTAAAACCCTACACACAGGACAAGAATGTGTCATAATTTAAAGAGAAGGATTTGACTATTTCTTTCTTTTTCTAGCATAATATTTAGAAAAGAATACTTGAGTTTTCAGTTTGAACAACGAACACTGGAACTTTCTTATTAATAATCTTTCACTGCTCACACTGATGGATTTGTGATTTCACACTGTACATTTGTTAACATTCTTTTTTCATATTTACAATATCAATAACATCAGTGTTGGGGAAAGTTACTTTTAAAAGTAATGATACAATATTGCGTTACTCCCTAAAAAAGTAACTAATTGTGTTGCTTGATTACTTTGTGTGGAAAGTAATATGTTACGCTACTTTTTTACGCTAATTTTAAGGTCCTTTTACACCAAAAGTGTAATGAAAAAGCCTCAGGATGAAGGAAATGCAAATTCACGCCTGGCTAGTAGACAGTGCAGCTCAAAAAAATATTTCAGCTGTGCTACCATTCTGGGACACAGAGAAGAACGTTCAACACACTTACTTCAGCAATAAAAACAAAAAAGGAAACACAAATGTGATGTTTATCTAAAGATGTTTGTGCTTATTAGTATGGTCCATTGGATCATCTAAAGTCAGCAGCAAAGACATTGGTTAATATAATGAGTTTAAATACGTATAGCCTATATTTGTGTTATTTTACATATTTAGTTATTGCAGGTTTGCGGAATATTCAGAGTTTGCATTTCACTGTTTTTATTCATTTTGAGGAATACTGAATCTGTTTTTGTGCAAGTGAGAGGAGTAAGTGTATGCTCACATTTAGTCTAGATCTACAATAACCATCATGATTAGACAGCGCACACAATGCCTCTGCATCTTACTCACGATTTCTCTCAACATGGGGACAGGAGAGCTGTCAGTCAATAAATGGAAAAACAAAGTAACTTACGTTACTTATTTGAAAAAGTAAATCAGATATTTTCTTTTAAATGTAAAAGTAATGCGTTACTTTACTAGTTACTTGAAAAAAGTAATCTGATTTCGTAACTCATGTTACTTGTAATGCGTTACCCCCAACACTGAATAACATTGACTGGAAAAGTATGTATGATGAATGTGATGCGATGCTTATCCATCAGTAGAAATATTGCAAAATAAATGTACTTTAAACATTTTAAAGGAAAAGATGACTAGAAATCTGTCAAAAGCAATCGTGTGAACATTTAAATGAATTAGCATCCAACCTGATGTGTCTTGACATGCTATATTATCTAACCTAAATCCAAAGTGTAAAATGTTCCTCATCCCAGTGTTAAAAGTGGCTTTAAAATAAACATGAAATCAAAATTGACCTTTGCTACCTTTTTGATACATATTCTTGGTCTTATTGTGCTTATTTCATCGGTGCGAAGTATTCCAAAGAAAACAAAATGTTTGTCTTTCTAATATTTAACCAAAATGTATAACTTCAGCCTCTGAAATGATTTTCTTTTTGGGATGATGTCACCAAGGACACTTTAATGTTAGCCTCTAAAATGTGCTTCATGTGGTAATATCTAAATTAACCGAATTTATTCAAAGTCAAGAAATACTAAATTTACTGAATTGGTTATACCAGTGGTTCTCAACTTTTCTGACTCCTAAGCCAACAACAATATTCAAAGGATTATAAGGATTGAGGACGAGGATTTTTTGCTTTAAATTTCTACCCAATAAAGTATTTTAGAGCTTGGCATATCTAGAAAAATGCATATTAATAAAATGTATGAAAATGTCCATGGTGTTATAGGATTTTATTAAAGGATTAGTTCACTTTAAAATGAAAATTACCCCAAGATTTACTCCCTCAAGTCATCCTAGGTGTATATGACTTCTTTCTGATGAACACAATTGGAGTTATATTAATAAATATCCTGACGTATCTGAGCTTTATAAAGGCAGGGAATGGGACCAACGAGTATGAAGCTCAAGAAAGTGCTTCCATCCATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28567 True 6346 lncRNA 0.33 2 2074919 2081442

Neighbor

gene id symbol gene type direction distance location
CI01000004_02068075_02072887 NA coding upstream 858 2067958 ~ 2074081 (+)
CI01000004_02033826_02057420 TSC22D2 coding upstream 17266 2033003 ~ 2057653 (+)
CI01000004_02014703_02018248 NA coding upstream 56453 2014600 ~ 2018466 (+)
CI01000004_02004004_02012588 NA coding upstream 61505 2002871 ~ 2013414 (+)
CI01000004_01999847_02001406 NA coding upstream 72140 1999847 ~ 2002779 (+)
CI01000004_02116310_02120268 VPS4B coding downstream 34495 2115937 ~ 2120360 (+)
CI01000004_02126757_02136937 KDSR coding downstream 45024 2126466 ~ 2137348 (+)
CI01000004_02143355_02186281 BCL2B coding downstream 61234 2142676 ~ 2186771 (+)
CI01000004_02528689_02568243 NA coding downstream 447247 2528689 ~ 2569227 (+)
CI01000004_02671199_02727898 GPR158B coding downstream 589757 2671199 ~ 2728328 (+)
G25297 NA non-coding upstream 47127 1978730 ~ 2027792 (+)
CI01000004_01961480_01979407 DVL3A non-coding upstream 113860 1960055 ~ 1979465 (+)
G25324 NA non-coding upstream 117658 1956642 ~ 1957261 (+)
G25345 NA non-coding upstream 118427 1956142 ~ 1956492 (+)
G25358 NA non-coding downstream 4317 2085759 ~ 2122591 (+)
G25325 NA non-coding downstream 57476 2138918 ~ 2139139 (+)
G25301 NA non-coding downstream 57936 2139378 ~ 2140889 (+)
G25372 NA non-coding downstream 110747 2192189 ~ 2192405 (+)
G25308 NA non-coding downstream 112965 2194407 ~ 2195224 (+)
CI01000004_01867166_01868986 C7H1ORF21 other upstream 201561 1867166 ~ 1868986 (+)
G25187 NA other upstream 458449 1604542 ~ 1616470 (+)
CI01000004_01332533_01345585 SCP2 other upstream 726745 1331583 ~ 1346008 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 1603073 467802 ~ 471846 (+)
G25329 NA other downstream 1615 2083057 ~ 2085707 (+)
G25882 NA other downstream 466633 2548075 ~ 2573049 (+)
G25992 NA other downstream 655094 2736536 ~ 2736768 (+)
CI01000004_02745885_02768971 NA other downstream 677014 2745885 ~ 2769135 (+)
G26245 NA other downstream 1427575 3509017 ~ 3522393 (+)

Expression


Co-expression Network